Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1558 ATGGGTGACTTTAAGCCGTTCTCAGACTCGGGCTCCGCCTCGATCTCAAGGTCAATCAGTGAGACCGTTAATGGGTCTCACCAATTTGTCATAAAGGGGTATTCTTTGGCCAAAGGGATGGGGGCTGGGCGGTATATAATGAGCGACACATTTAATGTTGGTGGCTACGATTGGGCGATTTATTTTTACCCAGATGGTAAGAACCCAGAGGATAATTCCATGTACGTTTCGGTTTTTATAGCCTTGGCGAGCGAGGGAACCGACGTTAGAGCTTTGTTCAAGTTGACGTTGGTCGATCAGAGTGGGAAGGGCAACGATAAAGTGCATAGCCATTTTGATCGCCCCCTGGAGAGTGGACCCTATACATTGAAGTATAGAGGTAGCATGTGGGGTTACAAGCGGTTTTTCAGAAGAACATTATTGGAAACTTCTGAGTACCTGAAAGATGATTGCCTCATCATGCATTGCACTGTTGGTGTTGTCAAAACTCGTTTTGAGGGAGCTAAACAGAGTGTTTTTTTACTACAGTCTGATATGGGTCAAGATTTTAAGGAATTGTTAGAATCTGAAGTTGGTTGTGACATAGTTTTCAAAGTTGGTAATGAAAGCTTCAAAGCTCATAAGTTGATACTTGCTGCCCGATCTCCTGTGTTTAGAGCTCAGTTTTTTGGACTTGTTGGGGATCCTAGCATAGAAGAAGTGGTATTAGAGGATATTGAGCCCTTTATCTTCAAGGCAATGCTTCTCTTCATTTATACGGACAAACTTCCTGACATCCATGAGGTTATGGGCTCCACACCCGTGTGCTCACAAACAGTCATGGTGCAGCATCTATTGGCTGCCGCTGATCTGTATAATCTTGATCGGCTGAAACTGTTATGTGAATCAAATTTATGTGAAGAAATCAATACAGACACTGTGGCAACAACACTTGCCCTGGCTGAGCAACATAATTGTCCACAGCTTAAATCCATCTGTTTAAAATTTGTTGCTAATCCAGCAAACTTGGGAGTGGTAATGCAGTCTGAAGCCTTCATGCACTTGAAAGAGAGCTGTCCCTCAATGTTATTGGAGTTGCTGGAGACATTTGCATCTGCTGAAGAGAATTCAAGTCAGCCATTAAGCCGGAAAAGAAGTGGCAGTAGCATATATGGGCAAGATTTAGCAGATGGAACTGCAGACGAATTGGCTAATCCAAATGGCAGGAATGTCAGGAGGCGGATGTAG 1227 0.4368 MGDFKPFSDSGSASISRSISETVNGSHQFVIKGYSLAKGMGAGRYIMSDTFNVGGYDWAIYFYPDGKNPEDNSMYVSVFIALASEGTDVRALFKLTLVDQSGKGNDKVHSHFDRPLESGPYTLKYRGSMWGYKRFFRRTLLETSEYLKDDCLIMHCTVGVVKTRFEGAKQSVFLLQSDMGQDFKELLESEVGCDIVFKVGNESFKAHKLILAARSPVFRAQFFGLVGDPSIEEVVLEDIEPFIFKAMLLFIYTDKLPDIHEVMGSTPVCSQTVMVQHLLAAADLYNLDRLKLLCESNLCEEINTDTVATTLALAEQHNCPQLKSICLKFVANPANLGVVMQSEAFMHLKESCPSMLLELLETFASAEENSSQPLSRKRSGSSIYGQDLADGTADELANPNGRNVRRRM 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1558 408 SMART math_3 29 141 IPR002083 GO:0005515
Bisa05g1558 408 CDD MATH 25 158 IPR002083 GO:0005515
Bisa05g1558 408 CDD BTB_POZ_BPM_plant 179 299 - -
Bisa05g1558 408 CDD BACK_AtBPM-like 299 362 IPR034090 -
Bisa05g1558 408 SUPERFAMILY TRAF domain-like 21 160 - -
Bisa05g1558 408 Gene3D Potassium Channel Kv1.1; Chain A 170 297 IPR011333 -
Bisa05g1558 408 ProSiteProfiles BTB domain profile. 193 256 IPR000210 GO:0005515
Bisa05g1558 408 Gene3D - 301 382 - -
Bisa05g1558 408 ProSiteProfiles MATH/TRAF domain profile. 24 158 IPR002083 GO:0005515
Bisa05g1558 408 SMART BTB_4 193 302 IPR000210 GO:0005515
Bisa05g1558 408 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 18 358 IPR045005 GO:0016567
Bisa05g1558 408 MobiDBLite consensus disorder prediction 368 408 - -
Bisa05g1558 408 SUPERFAMILY POZ domain 176 300 IPR011333 -
Bisa05g1558 408 MobiDBLite consensus disorder prediction 368 386 - -
Bisa05g1558 408 FunFam BTB-POZ and math domain 1 169 296 - -
Bisa05g1558 408 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 23 163 IPR008974 GO:0005515
Bisa05g1558 408 Pfam BTB/POZ domain 183 300 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1558 Bisa-ChrBisa05 28609207 28627945 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1558 05 28609207 28627945 Bisa05g1558 05 28609207 28627945 ECH