Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1527 ATGGTGTTGAGGTGGGAAGCACTTAAGCAAATGGCTTCTTCCAGAAGAAGGCGCTTAATCCTGCGTGTTGGTGCTTTGACTCCATCCAATCGTGCGGTGCAAGAAACTTTGCTGGGATTATCTCTCTCCACGTGGCAAAAGGATTGTGGCTTTTTGTCTGATGCGGGTGGGACCCGGATGACGTGGCCGTGGTTTTCTGAATTCTGGAGGTGGGGGTGCCAGAAGCTTCCGGGCTTTAACTCTGGACCGCACGTTTTGACAATGCCTTTCATATCGCAATTTCAACGGCAATCTGATTACAATCTCTTCAGTTCCACAACTCCAATCGTTATTGACAATGGCGCTTCATATTTTCGTATCGGATGGGCAGGAGAGACTGACCCCCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCACGCCATAAAGTCACCGGTGAAACTGTCACTATTGTTGGTGATCATAATCCAGCATTAATGAAATACTTCGACTGCACTCGCTCTGGACCACGCTCAGCATTTGATAGCAATGTTGTTTACCAGTTTGAAATAATGGAATATATTCTTGACTTTGGATTTGAACGAATGGGTGCAAATGGAGCGGAGATTAATCATCCTGTCCTGATCACAGAATGTGTATGCAATCCAGTTCACTCTCGTAGTAAAATGGCAGAGCTTCTTTTTGAGACTTATGGAGTTCCATCAATAGCCTTTGGGGTTGATGCAGCTTTCAGCTATAAGTATAATCAACAACATGGAGTTTGTGACAAAGATGGTCTCGCTATGTGTCCTGGATTTACTACAACCCATGTGATTCCATTTGTAGATGGGGAACCCGTTTATAAAGGATGCTGCCGTACTAATATTGGCGGATTCCACGTGACTGATTATTTAAAGCAACTTATTTCACTTAAATATCCTTATCATATGGCTAGATTCACGTGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATATTGCACAGGATTATGCTTCTGAATCTCGGTTGTTTCAAAGAGGGAGCAAGGAAGCTGAAGAGAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCACCAACTGAAGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATTAGAGAGAAACAAGGTCAAAGATTGCGAGAAATGGCTGAGGCAAAAAGATCTTCCAGAATAAATGAACTGGAAAATGAATTGCATGGTTTGGAATTTCTCTTGCAGCAGCTTGATCAAGTAGAAGAGAGTGACATTCCATCTTTCTTATTAGATACTGGCTATGTCTCTAAGCAAGAGATAGAATCTGCCCGTACTAAAGTTACACAATCTTTACGGAAAGCTAAAGGTGAACCAAAAAGTGAAGCTGAAAGTGAAAGGGCTGACACTCCTACCAATGAGAAGTATACTCTTATAGACATACCTGATGACATGCTAACCCCGGAGCAGCTCATTGAAAAGAAGAAGCAGTTGTCACTCAAATCCATGTCTGAAGGGCGGCAGCGATCAAAACAGAAACGCCTTGAAGAGGAAATGCTACGAGAGAGGAAACAACAGCTAGAGGAGGAGAAACGCCTAGAGAACCCAGAGCTTTACTTGGAACAATTGCATGCTAAATACAAAGACCTGTTGGAGAAAGTTGACCAACGAAAACGACTTAAGATTAATGGAAGCCATACAAACGGAAATAATTTGTCCGGGGGTGTCGGGCGTGGTGAGAGGCTGAATGCTGCTCAAAGAGAAAGAATGCGCCTCTTGACAACTGCAGCATTTGATCGTGGTAAAGGTGAGGACACATTTGGTGCCAGAGATGAAGACTGGCAACTCTACAAATTGATGAGTAAAGATAATGATGACGATGATGAAGGACCAGATGAAGACGAGGCAGAATTGGCTCGCATCTCTTCAAGACTCCGGGACTTGGATCCAACATTTGTGCCAAAGTCAGAAACAGGTACATCTCAATCTGCTGAGGTGCCACGTCTTCGTCCTCTCACCAAGGAAGATTTTCAGATTATTTTCGGCGTGGAAAGGTTCAGATGCCCTGAAATTTTGTTCAATCCAAATTGGATTGGGGTTGATCAAGTAGGATTAGACGAGATGGCTGGGGTTTCAATAAGAAGATTACCGTATAAGGATGCCAGCTTGGAAGATGCCAGCTTGGAAGAGAGACTAACTAATTCAATACTTGTGACTGGGGGAAGCTCTCTCTTTCCCGGTATGACTGAGCGCCTGGAAGCCGGAATTCGTATGATTAGACCATGTGGATCACCTATAAAAGTAGTTAGAGCATTGGATCCAGTTATGGATGCATGGAGAGGGGCTTCTGCTTATGCCTCGGCCTCACAGTTTCACACGCAGACTTTCTCTAGGATGGATTATTATGAGAAGGGTGAAGATTGGCTTCGCAGTTATCAACTGCAATACACATTATAG 2442 0.441 MVLRWEALKQMASSRRRRLILRVGALTPSNRAVQETLLGLSLSTWQKDCGFLSDAGGTRMTWPWFSEFWRWGCQKLPGFNSGPHVLTMPFISQFQRQSDYNLFSSTTPIVIDNGASYFRIGWAGETDPRVVFRNIVQRPRHKVTGETVTIVGDHNPALMKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFERMGANGAEINHPVLITECVCNPVHSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQQHGVCDKDGLAMCPGFTTTHVIPFVDGEPVYKGCCRTNIGGFHVTDYLKQLISLKYPYHMARFTWEKVEDLKMEHCYIAQDYASESRLFQRGSKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSRINELENELHGLEFLLQQLDQVEESDIPSFLLDTGYVSKQEIESARTKVTQSLRKAKGEPKSEAESERADTPTNEKYTLIDIPDDMLTPEQLIEKKKQLSLKSMSEGRQRSKQKRLEEEMLRERKQQLEEEKRLENPELYLEQLHAKYKDLLEKVDQRKRLKINGSHTNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDNDDDDEGPDEDEAELARISSRLRDLDPTFVPKSETGTSQSAEVPRLRPLTKEDFQIIFGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLPYKDASLEDASLEERLTNSILVTGGSSLFPGMTERLEAGIRMIRPCGSPIKVVRALDPVMDAWRGASAYASASQFHTQTFSRMDYYEKGEDWLRSYQLQYTL 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1527 813 SMART actin_3 106 809 IPR004000 -
Bisa05g1527 813 FunFam Putative actin-related protein 5 773 801 - -
Bisa05g1527 813 FunFam Actin-related protein 5 105 257 - -
Bisa05g1527 813 Pfam Actin 673 805 IPR004000 -
Bisa05g1527 813 Pfam Actin 106 447 IPR004000 -
Bisa05g1527 813 PANTHER ACTIN 108 801 IPR004000 -
Bisa05g1527 813 SUPERFAMILY Actin-like ATPase domain 258 806 IPR043129 -
Bisa05g1527 813 Gene3D Actin; Chain A, domain 4 645 697 - -
Bisa05g1527 813 FunFam Actin-related protein 5 290 344 - -
Bisa05g1527 813 Gene3D Actin; Chain A, domain 4 290 370 - -
Bisa05g1527 813 Gene3D - 698 769 - -
Bisa05g1527 813 MobiDBLite consensus disorder prediction 491 515 - -
Bisa05g1527 813 FunFam Actin-related protein 5 258 289 - -
Bisa05g1527 813 MobiDBLite consensus disorder prediction 437 477 - -
Bisa05g1527 813 Coils Coil 505 528 - -
Bisa05g1527 813 CDD NBD_sugar-kinase_HSP70_actin 109 289 - -
Bisa05g1527 813 MobiDBLite consensus disorder prediction 442 468 - -
Bisa05g1527 813 Coils Coil 535 555 - -
Bisa05g1527 813 Gene3D - 104 256 - -
Bisa05g1527 813 SUPERFAMILY Actin-like ATPase domain 105 246 IPR043129 -
Bisa05g1527 813 Coils Coil 396 416 - -
Bisa05g1527 813 FunFam ARP5 actin-related protein 5 homolog 698 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1527 Bisa-ChrBisa05 27780924 27789985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1527 671 800 Miscellaneous Gene Families AT2G42100 33.588 9.77e-16 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1527 05 27780924 27789985 Bisa05g1527 05 27780924 27789985 CCT
Bisa05g1527 05 27780924 27789985 Bisa05g1527 05 27780924 27789985 ECH