Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1347 ATGCTTCAAATTCACATTCTCTCGTCCTTTCCTCCACTCTACTCGAAGCCAAAGCCACTTTCCTCCTTAGTTGTCCTTCCTTCTTCTTGTTCTTGTTCTTTTTCTTCCTCTTTTACTACTACTCCTACTACTGCTACTACTCCAACACGGCGTCGTTTGAGGAGCACCTCCACTCCTGATAGAAAGAATCTCAAGCGTCTCACGTCTCGCATCGTCCAACTCACTCGCCGAAGACAGCTTCGCCAGATTTTGGAAGAGATTGAAATTGCCAAGAAACGTTATGGGAAGCTGAACACTATTGTCATGAATGCGGTGATGGAGGCCTGTGTTCATTGCGGTGATATTGATTCAGCTCTCAGGATATTTGATGAGATGACGAAACCGGAGAGTTGTGGTGTGGATACTGTCACTTATGCCACGCTTTTGAAGGGATTAGGTGAGTTGCGGAAAGTTGATGAAGCCTTTCAATTGCTTGAATCTGTGGAAAAAGGTATTGCACCAGGAAGTCCAAAATTGTCTGCACCACTGATCTGTGGCCTGCTAAATGCCATACTTGACACAGGAGACTTACGTCGTGCAAATGGCCTCCTTGCTCGTTATGGGTATGTGCTTCGTGAAGGTGGCAATTTCTCGGTCTCAGTGTACAACTTACTCATAAAGGGGTATATCAATGCAGGTTTTCCTCAGGATGCAGTAAATTTACACAGTGAAATGTTATATCATGGAATGACGCCTGATAGGCTCACCTACAACACTCTTATATTAGCATGTGTCAAGAGTCAAAGGATGGATGCTGCAATGCAATTTTTTGAAGATATGAAGGGTAAAGCACAGAAATTCACCTACAATAATCTATTGCCAGATAATGTCACCTATACAACACTGCTCAAGGGTTTTGGACAGGCCAAAGATCTGTCTTCGGTTCAGAAAATAGTGCTGGAAATGAAATCATGTCATGAATTGCACATTGATCGAACTGCTTATACTGCAATAATTGATGCTTTATTGAACTGTGGCTCTGTTAAGGGTGCTCAATGCATTTTTGGAGAAATATTGAAGCAAGCTGGTTGGAATCTGGAGTTGAGGCCAAAGCCTCACCTCTATCTTTCCATGATGCGTGCTTTCGCATTTAGAGGAGATTACAATGAAGTTAGAAACTTGCATAAGCGGATTTTGCCAGATTCTGCAGGAACTATCTTGCCAGTTGCCCAAGAAGAAGCTGATCATCTACTCATGGAAGCAGCGCTGACTGCTGGTCAGGTTGATGTTGCCATTGAAACTCTTATTAGTATTGCTTCAACATGGAAGAGTATGTCGTGGACAAGTCGTGGAGGAATGGTGACTTTGCGCATTGAGGCCATCTTGGGATTCTCAAAATCCATATTCAGTCCTTATCTACTTCCTCAGGTTTCCCCTGCTGAACCGGTTGAGAGATACATGTTGCCGTTTGAAGCAACAGGACCACTACAAGGTACCGTACAATTGAAGAAAGTGGTTATGCGTTTCTCGGATGAGGCAGTTGTTCCTGTCGTGGATGATTGGGGCAGCTGTATAGGATTGTTGCATCGTGAAGACTGTAATGAGTTAAATGCTTCAGTATCAACAATGATGAGAAGCCCACCTCCCACCGTTACAACCGCGACATCGGTTGGTCATGTGGTTGATTTGATTTTGGAAAAGGGGTACTCAATGATTATCATTGTAAAGTATACCAGCTCGTATGGTACTGCAGACAGCTCAAGGGCAGTTGGGGTTTTCGCATCAGAACAATTGTATAGGCTTATTACACCTCCATCTGAACCACGAGGACCGAAACTCTCAATCTATAGAAAATGA 1836 0.4363 MLQIHILSSFPPLYSKPKPLSSLVVLPSSCSCSFSSSFTTTPTTATTPTRRRLRSTSTPDRKNLKRLTSRIVQLTRRRQLRQILEEIEIAKKRYGKLNTIVMNAVMEACVHCGDIDSALRIFDEMTKPESCGVDTVTYATLLKGLGELRKVDEAFQLLESVEKGIAPGSPKLSAPLICGLLNAILDTGDLRRANGLLARYGYVLREGGNFSVSVYNLLIKGYINAGFPQDAVNLHSEMLYHGMTPDRLTYNTLILACVKSQRMDAAMQFFEDMKGKAQKFTYNNLLPDNVTYTTLLKGFGQAKDLSSVQKIVLEMKSCHELHIDRTAYTAIIDALLNCGSVKGAQCIFGEILKQAGWNLELRPKPHLYLSMMRAFAFRGDYNEVRNLHKRILPDSAGTILPVAQEEADHLLMEAALTAGQVDVAIETLISIASTWKSMSWTSRGGMVTLRIEAILGFSKSIFSPYLLPQVSPAEPVERYMLPFEATGPLQGTVQLKKVVMRFSDEAVVPVVDDWGSCIGLLHREDCNELNASVSTMMRSPPPTVTTATSVGHVVDLILEKGYSMIIIVKYTSSYGTADSSRAVGVFASEQLYRLITPPSEPRGPKLSIYRK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1347 611 MobiDBLite consensus disorder prediction 36 59 - -
Bisa05g1347 611 Gene3D Tetratricopeptide repeat domain 179 284 IPR011990 GO:0005515
Bisa05g1347 611 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
Bisa05g1347 611 PANTHER OS09G0431600 PROTEIN 33 600 IPR044781 -
Bisa05g1347 611 Gene3D - 489 593 IPR046342 -
Bisa05g1347 611 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 246 280 IPR002885 -
Bisa05g1347 611 ProSiteProfiles CBS domain profile. 536 605 IPR000644 -
Bisa05g1347 611 Gene3D Tetratricopeptide repeat domain 53 170 IPR011990 GO:0005515
Bisa05g1347 611 NCBIfam pentatricopeptide repeat 136 160 IPR002885 -
Bisa05g1347 611 NCBIfam pentatricopeptide repeat 214 246 IPR002885 -
Bisa05g1347 611 NCBIfam pentatricopeptide repeat 102 126 IPR002885 -
Bisa05g1347 611 NCBIfam pentatricopeptide repeat 249 274 IPR002885 -
Bisa05g1347 611 Pfam PPR repeat 290 318 IPR002885 -
Bisa05g1347 611 Pfam PPR repeat 327 353 IPR002885 -
Bisa05g1347 611 Pfam PPR repeat family 212 259 IPR002885 -
Bisa05g1347 611 Pfam PPR repeat family 98 145 IPR002885 -
Bisa05g1347 611 Gene3D Tetratricopeptide repeat domain 285 452 IPR011990 GO:0005515
Bisa05g1347 611 MobiDBLite consensus disorder prediction 36 53 - -
Bisa05g1347 611 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 98 128 IPR002885 -
Bisa05g1347 611 SUPERFAMILY CBS-domain pair 489 577 IPR046342 -
Bisa05g1347 611 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 134 164 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1347 134 428 Glycosyltransferase AT1G05670 26.421 1.24e-15 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1347 05 23832817 23838130 Bisa05g1347 05 23832817 23838130 ECH