Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1295 ATGGCGTTAGCTTGTAGGGTTTTATCATCAGTGAGAAAAAGGTGCATAGGAAGATTTCATTTTCTAGCACTTCCTTCAATTTCTCACCATTTGAATTTCCACAAGGAATTAGATTCAAATCCCTTGCTTATCAAATTGCTTCGGGTTTCCAATTCACAAATTAAATCCACGCTGGATCAGGAATTGTGTTCCTTTGAAAGCTCAAAATTTCCTTGGCAATCTCTAGTTACTTCTCTCAGGCCTTCTGAGAAAGCTCGGCTGGTTTTGGAATGGATTTTGGAGAAAATGCTGAAAGATAATGAAAGAAACCATAGTGTCTTCTCTGATTTCATCTTTCTTTGTGGCAAGCTTCAGGATGTACCACTAGCAATGCACGCGTTTACTTCTATGGAGGCTAATGGAGTTAAACCCACCTCCGTGGTTTTTAATTCCCTTATAAATGCTTGCTTGTGTTCACATAATATTACTGCAGCATTTAGCTTATTTGAGATAATGGAGAGTTCAGAGAGCTATAAACCTGATTTTCACACTTATAATATCTTTATTTCAGCATTTTCCAAGTCAGGGAATGTTAATGCCATGTTAGCTTGGTACTCAGCTAAAAAAGTTGCTGGACACGCTCCTGATCTCCAAATATTTGAATCCCTTATATCAGGTTGTGTCAAATCAAGAAATTTTGAAACTGCTGATAGAATTTATGAAGAAATGTTGACATCGGGAATTGTACCTAGTATATCCATACTGGAAAATATGCTTGAAGGACTTTGCAAGCAAAAGAGTTTGGGTCGAGCTGAGGAGTTCTTTAAGTTTGTGGTAGGTGTCAGATGGGACATCAGTGAAAACATGGCTGGGAAATTAATGGCATTGTATCTAGAATTAGGGCAAGTGGAGGAGATGGAGAAGCTACTTGAAACTCTGATGCAGTCCCATCATATTACTAATGGAGTTCTCTCCCAAATCCACTGTGGGATTATACGGATGTATGCCAAACTAGATAGATTGGATGAAGTAGAGTTTGCTGTGGGAAGAATGTTGAAACAAGGGCTATTATTCACAAGTGCAGGTGATGTGGAAAATGTTATCTGTTCATATTTCAGAAGAGAAGCTTACGATAGGCTAGACATATTCATCGAATGTATAGAGAGTTACTATATGATTAGCAAATCCACTTATGATCTGTTGATATCTGGCTATAGAAGGGCTGGATTACATGAAAAAGTAGATTCAATAATGGAAACCATGAAATCAGCTGGATTTGCGTAG 1263 0.38 MALACRVLSSVRKRCIGRFHFLALPSISHHLNFHKELDSNPLLIKLLRVSNSQIKSTLDQELCSFESSKFPWQSLVTSLRPSEKARLVLEWILEKMLKDNERNHSVFSDFIFLCGKLQDVPLAMHAFTSMEANGVKPTSVVFNSLINACLCSHNITAAFSLFEIMESSESYKPDFHTYNIFISAFSKSGNVNAMLAWYSAKKVAGHAPDLQIFESLISGCVKSRNFETADRIYEEMLTSGIVPSISILENMLEGLCKQKSLGRAEEFFKFVVGVRWDISENMAGKLMALYLELGQVEEMEKLLETLMQSHHITNGVLSQIHCGIIRMYAKLDRLDEVEFAVGRMLKQGLLFTSAGDVENVICSYFRREAYDRLDIFIECIESYYMISKSTYDLLISGYRRAGLHEKVDSIMETMKSAGFA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1295 420 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Bisa05g1295 420 Pfam PPR repeat family 137 187 IPR002885 -
Bisa05g1295 420 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Bisa05g1295 420 PANTHER EXPRESSED PROTEIN 38 419 IPR044179 GO:0003729
Bisa05g1295 420 Gene3D Tetratricopeptide repeat domain 321 420 IPR011990 GO:0005515
Bisa05g1295 420 NCBIfam pentatricopeptide repeat 390 419 IPR002885 -
Bisa05g1295 420 NCBIfam pentatricopeptide repeat 213 244 IPR002885 -
Bisa05g1295 420 NCBIfam pentatricopeptide repeat 140 174 IPR002885 -
Bisa05g1295 420 NCBIfam pentatricopeptide repeat 176 200 IPR002885 -
Bisa05g1295 420 Pfam PPR repeat 389 419 IPR002885 -
Bisa05g1295 420 Pfam PPR repeat 215 241 IPR002885 -
Bisa05g1295 420 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 387 420 IPR002885 -
Bisa05g1295 420 Gene3D Tetratricopeptide repeat domain 114 320 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1295 91 349 Glycosyltransferase AT1G05670 24.715 4.42e-16 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1295 05 22707128 22709071 Bisa05g1295 05 22707128 22709071 ECH