Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa05g1210 | ATGGGTACTGGTTGGAGAAGAGCCTTTTGCACTCGCGACTCGGAATCTACCATTTCGGATAGTAAGCAACGCAGAGGCACAAGTCCGAGTCCGAGTCCGAGCCCCAGAAGCTGTGTTCGATTGGCTTTTCTCTCTGGAGGAAGTACCCCTACTACTCCTCGCTCGCTGCAGCAAAACCAATCTCAGCCTGGGTCTAGTCCAAGCTTGCGTTGCAGAACAGTTTCCGAGGCAACAGCGAACGCCAATGACAGCCCCAGATTTCAGAACAAGAATACTACTCCTAGAGCTACCAAATCATCGCCTACGGCCGTATCGACTTCGAATCCGACTTCTCCTCGCTCTCCTCTGAAGTTGTCTCTCTTCAAGAACAGCTTCAAATTCAGAAGCAGTTGTGGAATCTGTTTGAACAGCGTGAAAACGGGTCAAGGCACGGCCATTTACACTGCAGAATGCAGTCACGCCTTTCATTTTCCCTGTATTGCTGGGCATGTACGCAAGCATGGAAGCCTAGTCTGCCCCGTCTGCAGCGCCACCTGGAAAGACGTACCTCTCCTCGCCGCACACAAGAACGTCGGTTCAGAATCTGCCGAACCAAACGACGTCGTCGCCGAGAAGATCGTCAAAAAACCGAATGCCGTTGTCGAGAAGAGAGTAGAAAATTTGTCTCCTATTTTCAGAACAAAGCCTATTGAACCGTCGCAACAATTACAACAAAAGCCAAAGCAATCCGATTCGTACAGGTCCTACAACGACGACGAGCCTCTCTTATCTCCCACCTCCGGGGGCCGAATCATTCCAATTCCTGAAGCTGACGAAAATGTCGGAGAAGACGAAGAAGACGATGTTGAGGAATTTCAGGGATTCTTTGCTAATTCAAAAGATTCATCCTCAGTCAAATCCTACTCCGACGACTTCCAAATGAACGAGAAGGATTCCAGAAACGTTCAGGTGAAGCTGATTCCCGAGTGTGCCGTAGTCTCTGTCTCTCGCACTCACGAGACTTACGCTTTGGTTCTGCGAGTGAAGGCTCCTCCGCCGCCACCCCCGGTTAGGAGCAGCAATACCAATACGACCCCGCTTCTTGGTTCGTCGCAGCGAGCGCCCATAGATCTCGTGACGGTCCTTGACGTAGGTGGAAGCATGACTAGTGCGAAGCTGCATATGCTAAAGCGCGCGATGCGTTTGGTTATTTCCTCTCTCGGCCCAGCCGATCGGCTCTCCATAGTGGCTTTCTCGGCTTCTTCCAAGCGGCTCTTACCCTTACGACGAATGACGGCTCAAGGCCAGCGCACGGCTCGGCGCATCGTTGACCGGCTGGTCACTGATCAAGGCTCTTGCGTAGGCGATGCCCTGAGGAAAGCCACCAAAGTGCTCGAGGACCGGAGAGAGAGAAACCCGGTTGCCAGCGTCATGCTCTTATCGGAAGGCCAAGACGAGCGAGTCCAAACTAGTAAGACCAACAGTCAACGAAAATCCTCGAGCCACCTGTCCTCGACCCGGTTCGCCCACATCGAGATCCCGGTTCGCTCATTCGGTTTCGGAAAAAAGAGCGGCTTCAGCCAGGAGCCGGCAGAAGATGCATTTGCCAAGTGCGTTGGGGGGTTATTGAGTGTGGTCGTGCAAGACTTGAGGGTTCAGCTCGGCTTCCAGTCCAGCTCCTCGCCGGCTGAAATCAGCGCTATCTACTTGTGCAGTGGACGGCCCACGGCGCTGAGCTCAGGCTCCGTACGGCTCGGCGATTTATATGCTGAGGAAGAGAGGGAGCTACTAGTGGAGCTGAGAGTTCCCACGTCGGCTCTGGGGACCCACCACGTGATGACGGTACGGTGCCTGTATAAGGACCCTGCTTCGCAAGAGATCGTATACGGTAGGGAACAGGCCCTACTCGTACCGCCGCCTCAGGCTATTAGAAGCGATCGTTTGAGGAATCTATTCATAGCCACTCGCGCCGTAGCCGAATCTCGTAGGCTAGTGGAGCACAACGACTTCGCCAGCGCTCATCATTTGCTGGCTTCGGCTAGGGCGCTTCTGGTGCAGGCTAGGTCGAGCTCGGCTGAGGAGTACGTGCGTGGGTTGGATGCTGAGCTGGCGGAACTTCATTGGCGGAGAGAGAATCCGATGGAGCAGCAAATGATGATGACGATGATGATGCAGCAACGGAGGAGAGGGAACGAGAGGGAGATGACGAGCTTGTTGGATGAGAATGGCGAGCCGCTCACGCCGACATCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGGTGGCAATTATGAAGAAGTCATTGAATAGAGTCAGCGACCTGCACGGCTTCGAAAACGCGAGGTTTTAA | 2328 | 0.5399 | MGTGWRRAFCTRDSESTISDSKQRRGTSPSPSPSPRSCVRLAFLSGGSTPTTPRSLQQNQSQPGSSPSLRCRTVSEATANANDSPRFQNKNTTPRATKSSPTAVSTSNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIAGHVRKHGSLVCPVCSATWKDVPLLAAHKNVGSESAEPNDVVAEKIVKKPNAVVEKRVENLSPIFRTKPIEPSQQLQQKPKQSDSYRSYNDDEPLLSPTSGGRIIPIPEADENVGEDEEDDVEEFQGFFANSKDSSSVKSYSDDFQMNEKDSRNVQVKLIPECAVVSVSRTHETYALVLRVKAPPPPPPVRSSNTNTTPLLGSSQRAPIDLVTVLDVGGSMTSAKLHMLKRAMRLVISSLGPADRLSIVAFSASSKRLLPLRRMTAQGQRTARRIVDRLVTDQGSCVGDALRKATKVLEDRRERNPVASVMLLSEGQDERVQTSKTNSQRKSSSHLSSTRFAHIEIPVRSFGFGKKSGFSQEPAEDAFAKCVGGLLSVVVQDLRVQLGFQSSSSPAEISAIYLCSGRPTALSSGSVRLGDLYAEEERELLVELRVPTSALGTHHVMTVRCLYKDPASQEIVYGREQALLVPPPQAIRSDRLRNLFIATRAVAESRRLVEHNDFASAHHLLASARALLVQARSSSAEEYVRGLDAELAELHWRRENPMEQQMMMTMMMQQRRRGNEREMTSLLDENGEPLTPTSAWRAAEKLAKVAIMKKSLNRVSDLHGFENARF | 775 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa05g1210 | 775 | ProSiteProfiles | VWFA domain profile. | 370 | 514 | IPR002035 | - | |
| Bisa05g1210 | 775 | Pfam | RING-like zinc finger | 131 | 160 | IPR001841 | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 476 | 498 | - | - | |
| Bisa05g1210 | 775 | CDD | vWA_C3HC4_type | 369 | 540 | - | - | |
| Bisa05g1210 | 775 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 250 | IPR013083 | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 1 | 115 | - | - | |
| Bisa05g1210 | 775 | Pfam | von Willebrand factor type A domain | 371 | 476 | IPR002035 | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 474 | 498 | - | - | |
| Bisa05g1210 | 775 | CDD | RING-H2_WAVH2 | 128 | 181 | - | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 44 | 115 | - | - | |
| Bisa05g1210 | 775 | SMART | ring_2 | 131 | 175 | IPR001841 | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 227 | 255 | - | - | |
| Bisa05g1210 | 775 | PANTHER | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR | 129 | 770 | - | - | |
| Bisa05g1210 | 775 | SUPERFAMILY | RING/U-box | 125 | 181 | - | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 10 | 35 | - | - | |
| Bisa05g1210 | 775 | Gene3D | von Willebrand factor, type A domain | 370 | 539 | IPR036465 | - | |
| Bisa05g1210 | 775 | ProSiteProfiles | Zinc finger RING-type profile. | 131 | 176 | IPR001841 | - | |
| Bisa05g1210 | 775 | SUPERFAMILY | vWA-like | 368 | 543 | IPR036465 | - | |
| Bisa05g1210 | 775 | SMART | VWA_4 | 368 | 553 | IPR002035 | - | |
| Bisa05g1210 | 775 | MobiDBLite | consensus disorder prediction | 225 | 282 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa05g1210 | Bisa-ChrBisa05 | 21106464 | 21108904 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa05g1210 | 05 | 21106464 | 21108904 | Bisa05g1210 | 05 | 21106464 | 21108904 | ECH |