Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1105 ATGGATCTTCCTCGAGATGTTGATCTTTATCTCAAAGAATCTATCGATGACTCCTTGGGACTGCCAATTTCGTTGCAAACTCTAGAGTCGAAGCTTCGAGCCTCTGAAGAGTCGCAACGGCTGCTACGCCAGCAGCACCTTTACCTACTCTCCAAATTGAAGGAGAAAGATCAATTGATTGAGCGCACTAAGTCTGAAGCGACTATGAGCGCACAAGCTCTAAAGAAGTTCGTGGAGGAGAATCAGAAATTGGCATCGGAATGTGCGAATCTTTTAAGTCAATGCCAGAAATGGGAAAGGGAATGCTCACTTTATGATCACGACAGGGAAGCATTAATGGAATTCGGAAACGAAGCTGATGAACGGGCAAAGGAGGCAGAGTTACGTGTTCACGAGTTGGAAATGGAGTTAGGAAAGTTATTGGAAGAATTGCAGTACTACAAGCATGAGCACGATATACGTTCGGTTGATTCTTCTTCTGCTAGCGCAGCCATGGAAGATAACTTACTTGACTCCCTTTTGCCAACGTTTACTAGTAAAGATGTTGCTTCTGCGTATTCCTTCTTGGAGGCAAACAGTGGAAATGAATCCTGTAGGAAGTTGCTAACAATGTGGAACTGCTTAAAGCCATCAACGCGGAGAGTTCTGTCTCTTGTTGCTGAAGTCAAGTCACTTGAGAAGGATAAGGAGCATCTAAGGATTAACCTTCACAGAGCTGAGGAGGAGGTCAAATTACTGTTTGATGAAAATAACATATTGGATAAGGAGAACAAAAGGTTAATGAAGCAATACAAGGAAAGGAACCATTCCGGATCTGGTGGAAAACATAGCTGCAGTGCATCTGCTAAGTCAAACAAGAGAAAGTCTAGTCCCAAGACAAGCAGCCCAATTGAGAGAAAGATTGAATTTGACGATCTAGATTCAGCAAGAACACCTTTGTCACCGTTGCGAAATAACTCCCCTGACTATAGAATGCATAAGAAGCTTCTTAATCCAAAGAAAACAGGTAGGCAGTTACGATCAAGATTTGTACAGTCCCATTCTTCACCACACCACGTTTCACTTCCGACTTCGTCTTTACTTACTTCTCAAGCCTCAAAGATTATCAATAGCCTCCTCTGTTCTGTTCGCTTCTTCCCTCTTAACTTTCCCACACAAATGGCATTCACCAAGGCTCTGGTTTTAGGTCTATTTGTAGCAATCAACATGGCCATGCCAGCCATGGCTAAAGTCTACACCGTTGGAGACACCTCTGGTTGGACCATTGGTGCTGATTATGGCACCTGGGCTGGTGACAAAACCTTCCAAGTTGGTGATTCCCTTGTGTTCAACTATGGAGCAGGGCACACGGTGGACGAAGTAAAAGAAAGTGACTACAAATCCTGCACCACCGGCAATTCCATCACCTCCGACAGCAGTGGCGCCACCACCATCGCTCTCAAGACCGCCGGCACCCACTACTTCATTTGTGCCATTCCCGGCCACTGTGGCGGCGGCATGAAGCTCGCCGTTAATGTCAAGGCTGGAAAAGCCGCCGCCGCCCCGTCTGCCACGCCGTCGTCCGGCAAGGCCTCACCTTCCGGCGATACCCCAACCTCCACCACCACCCCTTCCTCCTCCTCCTCCACCACCACGCCATCTACTTCATCAAATTCATCTTCAGCCTCAGGCCTTTCGCCAATTGTTGCTCTGACGATTGTTTCTTGGGTCTCGTACTGTCTGTTGCGTCTGGCCTGA 1737 0.4715 MDLPRDVDLYLKESIDDSLGLPISLQTLESKLRASEESQRLLRQQHLYLLSKLKEKDQLIERTKSEATMSAQALKKFVEENQKLASECANLLSQCQKWERECSLYDHDREALMEFGNEADERAKEAELRVHELEMELGKLLEELQYYKHEHDIRSVDSSSASAAMEDNLLDSLLPTFTSKDVASAYSFLEANSGNESCRKLLTMWNCLKPSTRRVLSLVAEVKSLEKDKEHLRINLHRAEEEVKLLFDENNILDKENKRLMKQYKERNHSGSGGKHSCSASAKSNKRKSSPKTSSPIERKIEFDDLDSARTPLSPLRNNSPDYRMHKKLLNPKKTGRQLRSRFVQSHSSPHHVSLPTSSLLTSQASKIINSLLCSVRFFPLNFPTQMAFTKALVLGLFVAINMAMPAMAKVYTVGDTSGWTIGADYGTWAGDKTFQVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSITSDSSGATTIALKTAGTHYFICAIPGHCGGGMKLAVNVKAGKAAAAPSATPSSGKASPSGDTPTSTTTPSSSSSTTTPSTSSNSSSASGLSPIVALTIVSWVSYCLLRLA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1105 578 Coils Coil 116 150 - -
Bisa05g1105 578 MobiDBLite consensus disorder prediction 273 291 - -
Bisa05g1105 578 MobiDBLite consensus disorder prediction 514 556 - -
Bisa05g1105 578 SUPERFAMILY Cupredoxins 408 506 IPR008972 -
Bisa05g1105 578 Coils Coil 25 45 - -
Bisa05g1105 578 MobiDBLite consensus disorder prediction 518 556 - -
Bisa05g1105 578 Pfam Plastocyanin-like domain 420 500 IPR003245 GO:0009055
Bisa05g1105 578 ProSitePatterns Type-1 copper (blue) proteins signature. 484 500 IPR028871 -
Bisa05g1105 578 Coils Coil 74 101 - -
Bisa05g1105 578 FunFam Blue copper 408 512 - -
Bisa05g1105 578 MobiDBLite consensus disorder prediction 266 301 - -
Bisa05g1105 578 CDD Phytocyanin 410 506 - -
Bisa05g1105 578 Gene3D - 408 513 IPR008972 -
Bisa05g1105 578 Coils Coil 215 256 - -
Bisa05g1105 578 ProSiteProfiles Phytocyanin domain profile. 410 508 IPR003245 GO:0009055
Bisa05g1105 578 PANTHER EARLY ENDOSOME ANTIGEN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1105 Bisa-ChrBisa05 19018688 19023802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1105 394 546 Miscellaneous Gene Families AT1G22480 50.000 5.93e-35 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1105 05 19018688 19023802 Bisa05g1105 05 19018688 19023802 ECH