Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1069 ATGTCAGGCGGTGGGTGTACCATAGTGTGGTTCAGAAGAGATCTGAGGATTGAGGATAATCCAGCACTGACGGCAGGGATGAGAGCAGGAGCAGTGGTGGCAGTTTTTATATGGGCACCTGAGGAAGAGGGTCAATACTACCCAGGCAGGGTGTCTAGGTGGTGGCTCAAACACAGTTTGGCTCATCTTGATGCTTCTTTGAGGAATCTTGGGACTCCTCTTATCACGAAGCGATCCACTGATAGTGTTTCTTCTCTCCTGGAGATTGTCAAGTCCACCGGAGCTACTCAACTCTTCTTTAACCACTTATATGATCCCCTGTCACTTATCAGGGATCACCAGGCAAAGGAGGTGCTGACTGCTCAGGGCATAGCCGTACGTTCCTTCAATGCAGATTTACTGTATGAACCATGGGATGTCAATGATGCACATGGCCAGCCATTCACAACGTTTTCTGCTTTTTGGGAAAGATGCCTCAGTATGCCTTATGATCCGGAGGCACCTCTTCTCCCACCTAAAAGGATTATTGCAGGTCCACTCTCGTTCAGTCATTTTCGTGATGTATCAAGGTGCCCTTCTGATAAATTGGTGTTTGAAGATGAATTAGAGAAGGCAAGCAATGCTCTTCTTGCCCGAGCCTGGTCACCTGGGTGGAGTAATGCCGACAAAGCCTTAACCACGTTCATAAATGGCCCATTGATTGAGTACTCAAAAAACCGCAGGAAAGCTGACAGTGCCACAACCTCATTTCTTTCCCCCCATCTGCATTTTGGTGAGGTGAGTGTCAAAAAGGTCTTCCATCTTGTCCGAATTAAGCAAGTTTTATGGGCCAATGAAGGGAACAAGGCTGGTGAAGAAAGCGTGAACTTGTTTCTCAAGTCTATTGGTCTTAGAGAATATTCAAGGTACATTAGTTTCAACCATCCCTATAGTCATGAAAGGCCTCTTCTAGGCCACCTCAAGTTCTTTCCTTGGGTGGTAAATGAAGGCTATTTCAAGGCATGGAGACAAGGAAGAACTGGGTACCCCTTGGTGGATGCTGGGATGAGAGAGTTGTGGGCCACTGGATGGCTGCATGACCGGATACGTGTTGTAGTTTCCAGTTTCTTTGTAAAGGTTCTGCAGCTTCCATGGAGATGGGGGATGAAATATTTCTGGGATACTCTCTTGGATGCAGATCTTGAGAGCGATGCTCTTGGTTGGCAGTACATTTCTGGTACTCTTCCTGATGGTCGTGAATTGGACCGAATAGATAACCCACAGTTTGAGGGTTACAAATTTGATCCAAATGGAGAATATGTAAGGCGTTGGCTTCCAGAACTTGCCAGACTACCAACTGAATGGATTCATCACCCATGGAATGCACCAGAACCTGTGCTTCAAGCTGCTGGAATTGAGCTTGGGTCAAATTACCCTCTTCCCATTGTGGGAATAGATGCAGCAAAAGCCAGATTGGAAGAAGCACTATTAGAAATGTGGCAACAGGAAGCAGCTTCAAGAGCTGCAATTGAAAATGGAACCGAGGAAGGACTTGGAGACTCCTCTGAATCCGCCCCCATTGCCTTTCCTCAAGACGTACAAATGGAGGAAATTCATGAACCTGTTAGGAACAACCCCCCTCCTGTTGCTCGCCCCTACGAGGATCAGATGGTCCCAAGCATCACTTCTTCCCTAGTGAGAGTGGAAGAGGAAGAAGCTTCTTCAGATCTTCGAAACTCAACGGGAGATAGTAGAGCTGAAGTGCCAACAAATGTAAATGTACAGCAAACGGCAAGAGAGGCATTGAACCAAGGGAATTTTCAGACTGTTCATAGAAATGCTCGCCTACAGAATACTGCAGTGGGACTGAGAAATGCAGCTGAAGATTCCACAGCAGAATCTTCGAGTAGTAGTAGGAGAGAAAGGGATGGAGGTGTAGTTCCAGTATGGTCTCCCTCAGCTTCTAGTTTCTCTGAGCAATTTGTGGGAGATGAAAATGGTATAGGGGCTAGTTCATCTTACTTGCAGAGGCATCCTCAGTCTCACCAACTGGTGAATTGGAGACAGCTACCTCAGACTGGGTAA 2064 0.468 MSGGGCTIVWFRRDLRIEDNPALTAGMRAGAVVAVFIWAPEEEGQYYPGRVSRWWLKHSLAHLDASLRNLGTPLITKRSTDSVSSLLEIVKSTGATQLFFNHLYDPLSLIRDHQAKEVLTAQGIAVRSFNADLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPEAPLLPPKRIIAGPLSFSHFRDVSRCPSDKLVFEDELEKASNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPEPVLQAAGIELGSNYPLPIVGIDAAKARLEEALLEMWQQEAASRAAIENGTEEGLGDSSESAPIAFPQDVQMEEIHEPVRNNPPPVARPYEDQMVPSITSSLVRVEEEEASSDLRNSTGDSRAEVPTNVNVQQTAREALNQGNFQTVHRNARLQNTAVGLRNAAEDSTAESSSSSRRERDGGVVPVWSPSASSFSEQFVGDENGIGASSSYLQRHPQSHQLVNWRQLPQTG 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1069 687 PRINTS DNA photolyase signature 143 159 IPR002081 -
Bisa05g1069 687 PRINTS DNA photolyase signature 340 356 IPR002081 -
Bisa05g1069 687 PRINTS DNA photolyase signature 360 378 IPR002081 -
Bisa05g1069 687 PRINTS DNA photolyase signature 399 413 IPR002081 -
Bisa05g1069 687 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 179 IPR036155 -
Bisa05g1069 687 MobiDBLite consensus disorder prediction 557 584 - -
Bisa05g1069 687 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 309 510 - -
Bisa05g1069 687 Pfam FAD binding domain of DNA photolyase 291 488 IPR005101 -
Bisa05g1069 687 MobiDBLite consensus disorder prediction 613 687 - -
Bisa05g1069 687 Coils Coil 478 498 - -
Bisa05g1069 687 FunFam Deoxyribodipyrimidine photo-lyase 309 498 - -
Bisa05g1069 687 ProSitePatterns DNA photolyases class 1 signature 2. 360 379 IPR018394 -
Bisa05g1069 687 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Bisa05g1069 687 PANTHER CRYPTOCHROME 6 498 IPR002081 -
Bisa05g1069 687 NCBIfam cryptochrome photoreceptor 6 489 IPR014134 GO:0009785|GO:0009882
Bisa05g1069 687 Gene3D - 134 301 - -
Bisa05g1069 687 Coils Coil 606 626 - -
Bisa05g1069 687 ProSitePatterns DNA photolyases class 1 signature 1. 340 352 IPR018394 -
Bisa05g1069 687 Pfam DNA photolyase 7 163 IPR006050 -
Bisa05g1069 687 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 200 496 IPR036134 -
Bisa05g1069 687 Gene3D HUPs 8 214 IPR014729 -
Bisa05g1069 687 MobiDBLite consensus disorder prediction 644 687 - -
Bisa05g1069 687 Pfam Blue/Ultraviolet sensing protein C terminal 518 632 IPR020978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1069 Bisa-ChrBisa05 18469436 18473621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1069 05 18469436 18473621 Bisa05g1069 05 18469436 18473621 ECH