Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1027 ATGGCTAGTCCCAAATCAGATGGAAGTGAGGGTAATGAGGTCTTTCAGAATGAGATCTGCAAGAGGCAAAGAACGTCATCAAGCTTCGATGAGGAGAATCCAAGACTAATTCCAAATCTCCCTGATGAGTTGTCACTTCAGATTATTGCCAGACTTCCTAGGACTTTCTACTTCAACCTAAAGTTGGTATCGCGGAAGTGGAATTTTACTATCATGAGTTCTGAACTATATAAATTAAGAAGAGAACTTGGAACAACTGAAGAGTGGCTATATCTGTTGACTAAGGTTGGAGAAAATAAACTTTCATGGCATGCTTTAGACCCTCGTTCTCGAAGATGGCAGAGGCTGCCTGCTATGCCCAATTTTGTTGATGAAGAAGATTCTAGAAGGGGTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATTAGAATTGCTGAGGTTGTAAGGGGTTTGCTGGGACAGAAGGATGAATTGGAGGAAATGCCCTTTTGCGGTTGTGCCATTGGAGCAGTTGATGGATGTCTCTATGTTCTAGGTGGATTCTCTAAAGCTTCAACTATGAGATGTGTTTGGCGATTTGATCCAATACAAAATACATGGAGCAAAGTGACTTCTATGTCTACAGGTAGGGCATATTGCAAGACAGGCATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAGGGTCAAGCTGGACTGATTCCCCTTCAGTCTGCTGAAGTTTTTGACCCCGCTACAGATACATGGTCCAGTGTACCTAGTATGCCTTTCTCGAGAGCACGAGTGCTGCCCACTGCTTTTTTGGCTGACATGTTAAAGCCTATAGCCACAGGATTGACCTCATACATGGGAAGGTTATGTGTCCCACAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTTGGAGGAGAAATCTATGATCCTGAAACAAATTCGTGGATGGAAATGCCAACTGGAATGGGTGAGGGTTGGCCTGCGCGGCAGGCAGGTACTAAACTGAGTGTTGTGGTGGATGGTGAATTATATGCTTTTGATCCTTCTAACTCTCTGGATAGTGGAAAGATCAAGGTATATGATCAAGGAGAAGATGCATGGAAAGTAGTTATTGGCAAAGTGCCCATATATGATTCTGCAGATTCGGAGTCTCCTTATTTACTCGCTGGTTTCCATGGAAAGCTTCATGTCATTACAAAAGATGCCAATCATGATATTGCTGTTCTTCAGGCTGACCTGCGCAATAATTTGGATTCTTTTCCTTCAACCTCATCTCCTTCACCCAGTTCTTTTCATGAATTTCCAGAACCCGTTGCTGAATCAGATACAGTTGTTTGGAAGGTAGTTGCCAGTAGATATTTCGGGCCAGCTGAATTGGTCAGTTGCCAAGTGATTGATATTTAG 1410 0.4284 MASPKSDGSEGNEVFQNEICKRQRTSSSFDEENPRLIPNLPDELSLQIIARLPRTFYFNLKLVSRKWNFTIMSSELYKLRRELGTTEEWLYLLTKVGENKLSWHALDPRSRRWQRLPAMPNFVDEEDSRRGSSRLWMWNMVEGIRIAEVVRGLLGQKDELEEMPFCGCAIGAVDGCLYVLGGFSKASTMRCVWRFDPIQNTWSKVTSMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPATDTWSSVPSMPFSRARVLPTAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWMEMPTGMGEGWPARQAGTKLSVVVDGELYAFDPSNSLDSGKIKVYDQGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQADLRNNLDSFPSTSSPSPSSFHEFPEPVAESDTVVWKVVASRYFGPAELVSCQVIDI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1027 469 PANTHER OS02G0202900 PROTEIN 21 467 IPR045887 -
Bisa05g1027 469 SMART fbox_2 40 80 IPR001810 GO:0005515
Bisa05g1027 469 ProSiteProfiles F-box domain profile. 34 80 IPR001810 GO:0005515
Bisa05g1027 469 Pfam F-box-like 37 78 IPR001810 GO:0005515
Bisa05g1027 469 SMART kelc_smart 223 273 IPR006652 GO:0005515
Bisa05g1027 469 SMART kelc_smart 176 222 IPR006652 GO:0005515
Bisa05g1027 469 SUPERFAMILY Kelch motif 97 400 IPR015915 GO:0005515
Bisa05g1027 469 SUPERFAMILY F-box domain 34 122 IPR036047 GO:0005515
Bisa05g1027 469 Pfam Kelch motif 212 260 IPR006652 GO:0005515
Bisa05g1027 469 Pfam Kelch motif 164 209 IPR006652 GO:0005515
Bisa05g1027 469 Gene3D - 73 378 IPR015915 GO:0005515
Bisa05g1027 469 CDD F-box_AtAFR-like 36 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1027 Bisa-ChrBisa05 17598877 17600286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1027 40 258 Miscellaneous Gene Families AT4G33900 26.549 7.52e-11 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1027 05 17598877 17600286 Bisa05g1027 05 17598877 17600286 ECH