Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0977 ATGAGGGCCCCTGTTGAACCTTCAGTGGTGGAGAGGTCAGATGGCGGCGAAAAGGAGAAGAAGAAACGGCGATCCAATCGTCGATCTAAACAGGCTTCTGCTTCCTCAGCATCTTGTAATTCAGTAAATGAGACACATGGGGTATCGTCAGAGTACTCAGGAAACACTGCGACACCTACTCATCCAGCTGCTTTGTCAAACAACTCTTCACTGAAGCAGCAGGAGGTCAAGATTTGCTCCCCTAATGATCAAGGGCTGTCCAGAGCATCAAATGTGGCTTTCACTTCAATGCCACCGATGCATATTGATGAGCATCAAATGGATCCTGTGGATTTGCAAAATATGGAACTGCATAATGGCGGAGTGTGCTCAAAATCATGTTCTGAGCCAGTTGGCTCATCCAGAACTTGTGCAAATGAAGACCTTTTCCCTTCCAATCAGACGGGGGTTAATACCCAGAGAAATTATTATAGTCCACACTGGTCAAATGAGGCTGTTGAGAAGGCTTTAGAGAAGGGTGAAGTTTTTAAAGCCCTGTTTCATGTCAATGCTCACAATACACTCGAGGCTTATTGTAGAATTGATGGAGTGCCAACAGATGTTCTCATTAGTGGAATTCCTGCCCAGAATAGAGCTGTTAATGGTGATATTGTTGCAGTTAAGATTGATGCTTTGCCGTTGTGGACTAAAATGAAAGGATCAAATGGTACTGTTTGTAGTACTGCACTACTAGAAGATTGTAACCTGCTTACAGAAGATAGTGAAGCGATTGGAAATATATCTACAGGAAAAGGTCAGGTAGATGTTGATTCTGAGACTGCTAATTGTAGAAGTGGCCTTGGTCGAAACAAGGAGGATGTGAATCATGACCCCACTGCTTACAGAAATTTTCCTTATCCTGGAAAGAATATTTTAAATAAGGATTGTGCTTCCCAGTGTTCAGCTTCCCATTTAGATCCACATGGAGTAGCTGGTCATGATGTTGATGCTGCTTCTCATCACTTAAATATCAGTTCTTGTAGCGGACACAGTGGTGTTATTAGTGCAGTGGAAAACATCTGTTCATTGATTAAGTCTTTCCCTTCAAAAAGACCAACTGGCAGAGTGGTTGCGATTGTTGAGAGATCTCCACGTCGAGAGGCCATTGTTGGTCATCTTAATGTTAACCAGGGATTTTCTTTTAGGGACTTGAGCAAAAAAGATGCAAAGAAAAATAAAAAATTGGTTTCTGAGCGCGAGTACATTCAGCTGACACCAACTGATCCAAAGTTGCCAAAAATGATGCTCCTTGTTAGAGATCTACCTAACTCCATAAAGAAAAGGCTGCAAAGTGGGGATGCAACAATTGAAATGGACCTCGTAGCTGCAAGAATTGATAACTGGTTTGACAATAGTCCTTGTCCACAAGCTCATGTCTTGCGTGTTTTTGGACGAGGTGGTGAAATGCAGCCACAATTAGATGCTATTTTATTTGAGAATACAATCTGTGTGTCTGAATTTTCATCTGAAGCTCTGTCCTGCCTTCCATATGTTTCCTGGGAGGTGCCAGAGAAAGAATTTCAAAATAGAATGGATCTTAGAAATTTGTGTGTATTCACCATTGATCCTTCAACTGCCACTGATCTGGATGATGCACTGTCTATTGAGAAGTTATCTAATGGAAATTTTAGAGTAGGTGTCCACATTGCTGATGTGTCATACTTTGTTTTACCTAACACAAACTTGGATAGCGAGGCTCAGGCTAGGTCAACAAGTGTTTATATGGTGCAGAGAAAGTTACCGATGTTGCCGGCATTGTTTTCTGAGAATATAGGTTCACTTAATCCTGGAGTGGATCGACTTGCGGTTTCCATGCTCCTGGACATAAACCTTGATGGGGATGTTGTTGATCGTTGGATTGGTCGTACTGTGATTCAATCGTGTTGTAAGCTTTCATATGAACATGCACAGGACATTATTGATGGGGTTATTGATGTTGACTGTTCAAAGACAATAGGAGATCACTATCCTAAGGTGCATGGCCATTTTAAATGGCCTGATATTATCAGTTCAGTGAAGTGGCTTTATGAAATGTCAAAAGTTCTGAGAGATAAGAGGTTTAATGATGGGGCTCTACGGCTTGAGAACCCAAAAGTTGTTTTTCTGTTTGATGAATATGGAATTCCTTATAATAGTATGCTCTGTAAAGAATCAAACTTTCTTGTTGAAGAATTCATGCTTTTGGCTAATAGAACAGCTGCTGAAGTCATATGTAGAGCATATCCTGATGGTGCATTGTTGCGGAGGCATCCTGAACCTAATTTGCGGAAGCTGAGAGAGTTTGAGGCATTTTGTCATAAACATGGTTTAGAACTGGACACATCTTCATCTGGCCGGATCCATTGGTCATTAGAGCAGATCACTGAAAAGCTCAAGGGTGACCCTACACTTTGTGATATTCTTATTTCCTATGCTACAAGGTCAATGCCGATGGCGTCATATTTCTGTACTGGGGATATGAAGGACGAACAAAATAGTTGGGGTCATTATGCACTGGCGGTCTCTGTTTACACACATTTTACATCACCTCTGCGTCGTTATCCGGATATTGTTGTTCACCGGACACTACTTGCTGCAATAGAGGCTGAGGAAATGTATTTGAAGCATTTAAAGACATTGCAGCCTAACAAGGGAGAGGAAGTAGGAAAAAGATATTTCACTGGTATGAGCTTTGGGAAAGAAGCTGCAGAATCAAGGGAAGGGAAAGAAGCGCTCTCAGCTGCAGCTTTGAAGCACGGAGTTCCGTGTACTGAAATACTTACGGATGTTGCTGCTGATTGCAATGAGAGAAAGCTAGCTAGTAGAAATGTTAAGGATGCTTGTGATAAACTCTACAAGTGGGCTCTTCTCAAGAAGAAGGAGGTGTTATTATCAGAAGCAAGAATATTGGGACTAGGTCCGAGGTTCATGTCAATTTATATTCAAAAGCTAGCTATAGAGCGGCGCATATATTATGATGAAGTTCAAGGCTTGAGTGTGGAATGGCTTGATGCAACATCCACTTTGGTGCTTAGCTTGTGTACTGATAAGCGTGCATTCAGGAGAGGTAGCCCCGGTAAATGGAGGGCATTGGAAGAAGTTGTGTTACTCTCTCGTCCATATGACCTGAATGTTGCCAAAGATGGTTCTAATGAGCGTGATACAGTGAATGTGGGAGATGGTATTGCTGCTACGGACAGGGATCTAAGTTCCGGATCAGACAGTTCAGGGACTGAGATTGACCCTGCAGTTTTCCCTCTCACCCTGCGTCTCCTTTCAGCAGTTCCTGTGGCACTTCATGCTGTTGGTGGTGATGATGGACCTCTTGATATTGGGGTGAGGCTTTACATGAGCTCCTATTTGAGGTAA 3387 0.424 MRAPVEPSVVERSDGGEKEKKKRRSNRRSKQASASSASCNSVNETHGVSSEYSGNTATPTHPAALSNNSSLKQQEVKICSPNDQGLSRASNVAFTSMPPMHIDEHQMDPVDLQNMELHNGGVCSKSCSEPVGSSRTCANEDLFPSNQTGVNTQRNYYSPHWSNEAVEKALEKGEVFKALFHVNAHNTLEAYCRIDGVPTDVLISGIPAQNRAVNGDIVAVKIDALPLWTKMKGSNGTVCSTALLEDCNLLTEDSEAIGNISTGKGQVDVDSETANCRSGLGRNKEDVNHDPTAYRNFPYPGKNILNKDCASQCSASHLDPHGVAGHDVDAASHHLNISSCSGHSGVISAVENICSLIKSFPSKRPTGRVVAIVERSPRREAIVGHLNVNQGFSFRDLSKKDAKKNKKLVSEREYIQLTPTDPKLPKMMLLVRDLPNSIKKRLQSGDATIEMDLVAARIDNWFDNSPCPQAHVLRVFGRGGEMQPQLDAILFENTICVSEFSSEALSCLPYVSWEVPEKEFQNRMDLRNLCVFTIDPSTATDLDDALSIEKLSNGNFRVGVHIADVSYFVLPNTNLDSEAQARSTSVYMVQRKLPMLPALFSENIGSLNPGVDRLAVSMLLDINLDGDVVDRWIGRTVIQSCCKLSYEHAQDIIDGVIDVDCSKTIGDHYPKVHGHFKWPDIISSVKWLYEMSKVLRDKRFNDGALRLENPKVVFLFDEYGIPYNSMLCKESNFLVEEFMLLANRTAAEVICRAYPDGALLRRHPEPNLRKLREFEAFCHKHGLELDTSSSGRIHWSLEQITEKLKGDPTLCDILISYATRSMPMASYFCTGDMKDEQNSWGHYALAVSVYTHFTSPLRRYPDIVVHRTLLAAIEAEEMYLKHLKTLQPNKGEEVGKRYFTGMSFGKEAAESREGKEALSAAALKHGVPCTEILTDVAADCNERKLASRNVKDACDKLYKWALLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVQGLSVEWLDATSTLVLSLCTDKRAFRRGSPGKWRALEEVVLLSRPYDLNVAKDGSNERDTVNVGDGIAATDRDLSSGSDSSGTEIDPAVFPLTLRLLSAVPVALHAVGGDDGPLDIGVRLYMSSYLR 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0977 1128 SUPERFAMILY Nucleic acid-binding proteins 366 495 IPR012340 -
Bisa05g0977 1128 SUPERFAMILY Nucleic acid-binding proteins 155 375 IPR012340 -
Bisa05g0977 1128 ProSitePatterns Ribonuclease II family signature. 842 866 IPR022966 -
Bisa05g0977 1128 Pfam Dis3-like cold-shock domain 2 (CSD2) 414 493 IPR041505 -
Bisa05g0977 1128 FunFam DIS3-like exonuclease 2 146 248 - -
Bisa05g0977 1128 MobiDBLite consensus disorder prediction 30 75 - -
Bisa05g0977 1128 Pfam RNB domain 523 873 IPR001900 GO:0003723|GO:0004540
Bisa05g0977 1128 SUPERFAMILY Nucleic acid-binding proteins 485 965 IPR012340 -
Bisa05g0977 1128 MobiDBLite consensus disorder prediction 1 75 - -
Bisa05g0977 1128 Gene3D - 397 481 - -
Bisa05g0977 1128 Gene3D - 146 241 - -
Bisa05g0977 1128 SMART RNB_2 523 875 IPR001900 GO:0003723|GO:0004540
Bisa05g0977 1128 Hamap DIS3-like exonuclease 2 [DIS3L2]. 18 1103 IPR028591 GO:0000175|GO:0034427
Bisa05g0977 1128 PANTHER RIBONUCLEASE 19 1125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0977 Bisa-ChrBisa05 16749034 16755140 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0977 05 16749034 16755140 Bisa05g0977 05 16749034 16755140 ECH