Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0953 ATGGACGAGTCCGTGCTGCAACTCATCTCCGAGATCGGGGTTCGTCTTGGCCAACGAAGTCGTCCGAGCAAGGATTTTCTTGTCAAATCCCTGCGGCAAGCTGTAAGTGCTTTGTCTCAGCTAGAGCAGTTTTCTCTGGTTGAAACCACCAACGAAGTACAAGCTGAGAAAAAGAAAGAAGCTCTCAGAAAGCAAAAAGATGCCCAAAATCGAGAGGCTTCCTTAAAGCCCCTAGAAAATGTTATCATTTGTGGTCTTCTTCAACATGCAGATAAAGATGTTAGACTTCTAGTTGCTATTTGTGTCACTGAGATTTTTAGGGTCAGGGCACCTGAACCACCTTTTGAGGACAAAGATTTAAAGGATGTATTTAAACTTATCATTAGTATCTTTGCGGATCTAGCTGATACTTCAAGTCCACTCTTTTCAAAAAGGGTTAAAATATTGGACACTGTGGCTCGATTAAAGTGCTGTGTGATAATGCTGGATATTGACTCTGAAGATTTGATTCTTGAGATGTTCAATATTTTCTTCTCTGTTGTAAGAGATGACCACCGTGCAAGTTTGATTGATGCTATATCTTCTATAATGGTAGATATATTAAATGTAGGAGCTTCTCAGCAACTATTGGAAGTGATTTTACGAAGTCTTATAAAGGGAAAGAAAGATGCAACCTGTGCTGCTTCTCAACTAGCTGCATCTGTCATCAATTGTGCAGATGAGAAAGAGCTGAAGCCCCTTGTTTCTTGGTTTCTAACTGCTTGTATAAATGACAGAGATGCTGTAAGCAGTGGGTTGAAAGAATTTTACCATGAAATTATCTTCAAAATTTTCCAGTGTGCTCCTCAGATGCTTATTGCTGTCATCCCAAGCTTAATAGGAGAATTATTGGCTGATCAGGTTGATGTTCGGATAAAAGCTGTTAATTTGGTTGGGAAGCTTTTTGCACTTCCGGAACGTCATGCTGCACAGAAGTATCATGATCTTTTTGTGGAGTTTTTGAAAAGATTTTCTGATAAATCTGTGGATGTTAGAATCAGTGCCTTGCAATGCGCCAAAGCTGTTTATGTAGCAAATCCATTTGGGAGGGAATTTCATGAAATTATCACTGCTGTTGAAGATCGATTACTAGACTTTGATGACAGAGTGAGAATGCAGGCAGTTCTTGTGGCCTGTGATCTTTGCACATCTAACCTGCGACTTGTTCCATCTAAACTAATATCTCAAGCCACAGATAGACTGCGGGATAAAAAGATATCTGTTAGAAAGCGGGCCTTGCAAAAGCTTATTGAAGTATATCAAGATTACTGCAAGAAGTGTTGTGAAGGCAGCATGACAGCTAGTGATCACTTTGAAGAGATTCCATGTAAAATTATGATGCTTTGCTTTGATAAAGACTGTAAGGAATTCAGGGCACAAAACATGGAAATAGTTCTTGCTGATGATTTATTTCCAGAGCATCTTTCTGTTGAGGAAAGGACAAAGCACTGGATACACATGTTTTCTCTTTTCAGTCCTCTTCATGAAAAGGCATTAAATACTATTTTAACTCAAAAGAGAAGGTTACAAAATGAGATGAAAAACTATTTGGCTTTGCGGAAGAAATTGAAGGAAAATTGTTCTGCAGATATACATAAGAAGATTGAAAATATGTTTGCAAAAATGGCATCATCCTTTCCAGATCCTCCCAAAGCAGAAGAATGGCTACAGAAACTGAACCAGTTTAAAGATAATAATGTATTTAACTCACTTGAACAATTGTTGGAGGAGCAGACTTTTACAACTGGACAAATCATCCAAGACAAACTTCTGAAAATGATAGGGGAGAGCAATCCATATTTTGAGTTTCTACGTTCACTCTTCATCAAATGTTCATACAACATTTTCAGCTCAGAGCACGTCCATTATATTTTAGATTATCTTTCTAACACCACAATTGGAAACAAGCACTTGGAGGATTCTTCTGTAAAGCTTCTCCTGGCCGTTGTTAGAACTTTTCCTACAATCCTGAGAGACTCAGAAGAGCAGTTCCAAATATTGTTGGAGCAGAAGAGCCCAGTTAATGACAAGCTGATTGAGGTCTTAGCAAAGGCAGGCGCTCACATTTCTGTAAAACTCAGTGATGTTTACCCATTTCTTGAGAGAATGTGCTTGAAGGGAACTCGGACACAGGCCAAATGTGCTGTTTCAGCAATTGCTGCCTTGAGTTCTGAGCAATCAGTTTTCTCAAATTTATATGAGGGACTCATTGCTTCCTTGTATAACCAGTGTAATATCCCAACAGTTTTACAGTCTTTGGGATGCCTTGCACAATACTCTATTTCAACTTTTGAAACTCGAGCTGAGGAGATTACATCATATATTTTTCAGAAGATTATTCAAGTGGAGCACTTAGATGACATTCATCATGCAACATCGTTTGATGATACTTATCAGTGTAGTGATTCCTGCCAGTTGAAGATTTATGGGCTAAAAACACTAGTAAAGAGTTGTCTGCCGGACCAAGGGAACTGTGTGAGACTGAAAATTAATGTTCTGTTGGACATTTTGTTAAGAATGGTACAGCAGAGTGATCATTTTGTGAGTTTGGATTCTAGTGGAAGTGATAGGGCTCATATCAGATTAGCTGCTGCAAAGTCAATTCTCCGGCTTTCTAGGAGGTGGGATCTGCATATTAGTCCAAAAATTTTTCGCTTCACTATTTTGATTGCAAAGGACTCCTCTTCTTTTGTTAGGAGATCATTTCTAAATAAAATACATAAGATGTTGAAGGAGCGTAGGCTGCCCATTAGATATGCATGCGCTTTTCCAATGGCCGCGACGGATGGCATCGAGGATCTACAATATCATAACGCCAAATATATGGCAGAATTTATCAAAGATTACAGTATGGTAGCTCGGATGCGGCAAACTTCTGCTGTGGAAAGAGCAATTTTTGACTACCCTGCATACATATTGGTCTTTCTGATTCATGTACTTGCTCATGATACTGGCTTTCCATCTGAAGGCTGTCAAGATGAACAAATGTATGCTAACCTCTGTAGTCCTCTCTTTTTTGTTATGCAGGCATTAATCAATTCAAGTAATGTTGATGGTGACCCCGACCTTGTTAATGATGCTGTATTATATCTGTTTAGCATTTTACGAGCTATTAGAAAAGCTGAGGATGCCGTTGATGTGCAGATGACCACTAAGCTGCACATGCTGGCTGACATTGGCATATTCTTTTTAAATGCATTTAAACATGGTGCAATTTCTTTGTCACAAGCCCCTGGACAAATTTTGCTGCCTTCATCATTATATAGAATCAGTTTTGCTAAGAATAATGCTAATTTAAGAAAGTCCTATTTTGATGAATGCTTTCTGAGTAGTGTCTTGCAGAAACTTAAATCTAATGTCCCTCAGCTATGTGGTCAGAAGCTTGATAAAACTCTTAAACATGGTCGCAAGTGTCAAGAGGATGTTCCAAAGTCTAATTTTAATACTTACGTTGTATCAAATTTGTCATCTGGCAAACTGGATGATTTGGCAAAGAGGGAAACAACAACACATATGAAAGCTGTAAGACCTAATATCCCTTTGGGGCAAAGGAGAAAATGTGCTGTGTCAACTGTTTCTGGATCAGTTGGTTTGCATGAATGCTCCACTATTGATAAGCAACAGAATATTACATCTAAACACTGTGAAAGAACTCTGGAGAGAAATCAACTTTCTTGTGGTTCTGTGAGCTCGAAGGATTCTCTGGTTGAAAAACATGTTTCAACTCGTAAATCCAAAAGAGTGGCTGCTTTGTTGATGGAAAATGCTGTGCCAAGCTGCAAATCTACTGTTCACCCTTCAAAGTGCCCCAGAACCAACCTCAAAGATACTCCTGGCTCAAAGAAGAAAGATATACTGGCAGACCGTTCAAATGAATGTCACGTATGGGACTGTGATCCTGGTAACAACCTTAGTAGTCTAAAGAAAACTATTGCTACAACAGGAGGTGGAGCAACCAAAGAGGGAACAGCACTTGACCAAGAAAACGGGAGCTGGAATGGAACGGGAAAATCCACAGGGACTTCAGCATCAATAGCTGTCAATACAAATCCAAAAGCTGCATCCCGATCAAGACGGAAAGGATAA 4125 0.3922 MDESVLQLISEIGVRLGQRSRPSKDFLVKSLRQAVSALSQLEQFSLVETTNEVQAEKKKEALRKQKDAQNREASLKPLENVIICGLLQHADKDVRLLVAICVTEIFRVRAPEPPFEDKDLKDVFKLIISIFADLADTSSPLFSKRVKILDTVARLKCCVIMLDIDSEDLILEMFNIFFSVVRDDHRASLIDAISSIMVDILNVGASQQLLEVILRSLIKGKKDATCAASQLAASVINCADEKELKPLVSWFLTACINDRDAVSSGLKEFYHEIIFKIFQCAPQMLIAVIPSLIGELLADQVDVRIKAVNLVGKLFALPERHAAQKYHDLFVEFLKRFSDKSVDVRISALQCAKAVYVANPFGREFHEIITAVEDRLLDFDDRVRMQAVLVACDLCTSNLRLVPSKLISQATDRLRDKKISVRKRALQKLIEVYQDYCKKCCEGSMTASDHFEEIPCKIMMLCFDKDCKEFRAQNMEIVLADDLFPEHLSVEERTKHWIHMFSLFSPLHEKALNTILTQKRRLQNEMKNYLALRKKLKENCSADIHKKIENMFAKMASSFPDPPKAEEWLQKLNQFKDNNVFNSLEQLLEEQTFTTGQIIQDKLLKMIGESNPYFEFLRSLFIKCSYNIFSSEHVHYILDYLSNTTIGNKHLEDSSVKLLLAVVRTFPTILRDSEEQFQILLEQKSPVNDKLIEVLAKAGAHISVKLSDVYPFLERMCLKGTRTQAKCAVSAIAALSSEQSVFSNLYEGLIASLYNQCNIPTVLQSLGCLAQYSISTFETRAEEITSYIFQKIIQVEHLDDIHHATSFDDTYQCSDSCQLKIYGLKTLVKSCLPDQGNCVRLKINVLLDILLRMVQQSDHFVSLDSSGSDRAHIRLAAAKSILRLSRRWDLHISPKIFRFTILIAKDSSSFVRRSFLNKIHKMLKERRLPIRYACAFPMAATDGIEDLQYHNAKYMAEFIKDYSMVARMRQTSAVERAIFDYPAYILVFLIHVLAHDTGFPSEGCQDEQMYANLCSPLFFVMQALINSSNVDGDPDLVNDAVLYLFSILRAIRKAEDAVDVQMTTKLHMLADIGIFFLNAFKHGAISLSQAPGQILLPSSLYRISFAKNNANLRKSYFDECFLSSVLQKLKSNVPQLCGQKLDKTLKHGRKCQEDVPKSNFNTYVVSNLSSGKLDDLAKRETTTHMKAVRPNIPLGQRRKCAVSTVSGSVGLHECSTIDKQQNITSKHCERTLERNQLSCGSVSSKDSLVEKHVSTRKSKRVAALLMENAVPSCKSTVHPSKCPRTNLKDTPGSKKKDILADRSNECHVWDCDPGNNLSSLKKTIATTGGGATKEGTALDQENGSWNGTGKSTGTSASIAVNTNPKAASRSRRKG 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0953 1374 Gene3D - 5 467 IPR011989 -
Bisa05g0953 1374 Pfam Sister chromatid cohesion protein PDS5 protein 25 1102 - -
Bisa05g0953 1374 MobiDBLite consensus disorder prediction 1326 1374 - -
Bisa05g0953 1374 SUPERFAMILY ARM repeat 61 571 IPR016024 -
Bisa05g0953 1374 Coils Coil 51 72 - -
Bisa05g0953 1374 Coils Coil 512 539 - -
Bisa05g0953 1374 CDD PDS5 27 667 - -
Bisa05g0953 1374 SUPERFAMILY ARM repeat 541 995 IPR016024 -
Bisa05g0953 1374 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 5 1271 IPR039776 GO:0007064
Bisa05g0953 1374 MobiDBLite consensus disorder prediction 1337 1367 - -
Bisa05g0953 1374 MobiDBLite consensus disorder prediction 1275 1296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0953 Bisa-ChrBisa05 16398869 16419591 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0953 05 16398869 16419591 Bisa05g0953 05 16398869 16419591 ECH