LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g0925	ATGGACGTGAAAAGCAGGGGAATCGCATTCGCTTTCTTCTTCCTTGGATTTTCCGCTATTTTCCTTCTCGGTTTCTCAGCAGCCAATCAACCTCGATTCATCGGAAGGCCCGCAACATCAGCTTGTAGTAATCGCATCGGCTCCTCGGTTGTTTTCCGGGTTCAAGGGAATGTGTATCCCCTCGGGTATTACTCAGTGTCTCTCAACATTGGGAATAAAGTATTTGAGCTTGACGTTGACACCGGAAGCGACCTCACTTGGGTACAGTGCGACGCCGGCGTACCGTGTAAAGGTTGCACCAAGCCTCGAGATCAACTATATAAAGCCAAGAACCTGGTGCATTGTGTGGACAAGCTGTGCGCAGGAGTGCAGTCATCAGAAAGCCAATCAAGCCATCATTGTCATTCCCCTAATGACCAATGCGACTATGAGGTGGAGTACGCAGACCATGGCTCATCTCTGGGCGTATTGGTCCGAGACTTCGTTCCACTTCGCCTCACCAATGGCTCCGTGCAACGTCCAAACGTAGCCTTCGGGTGTGGATATGATATAGAGCATTCTGGATCTGGTGCGACATCTGCACCATCAACAGCAGGAGTGCTAGGGCTTGGGAATGGAAACGCAAGCGTTTTGTCGCAGCTGAGTTCAATGGGAGTGGTGCGCAATGTGGTGGGCCATTGCTTCAGTAGTAGAGGAGGAGGTTTTCTGTTTTTCGGAGACGGTGTCGTTCCGTCCTCTGCAATTTCGTGGACACCACTTCCGCCTGGTTCCTCAGTAAAACACTACATCTCAGGACCAGTGGATCTGCTTTTCAATGGAAAGCCAACGAGTGTTAAGGGTCTTCAAGTTATCTTTGACAGTGGGAGCTCCTACTCCTACTTCAATTCTCAAGCTTATCAAGCCCTTCTTAATACGATTATTGGAGATTTAAAGGGAAAGCAATTGACTAGAACAACTGCAGATCGATCCCTCCCAATTTGCTGGAAGGGTGCAAAGCCTTTCAAATCTTTAACAGATGTCACCAATTTTTTTAAGCCCTTAACACTAAGCTTTACTAACACAAGGAATTTGCAGCTTCAACTGCCTCCACCTTCTTATCTCATTCTCACTAAATACGGCAATGTATGTTTGGGAATTCTGAACGGCGCTGAAGCTGGACTAGGAAATATTAATATAATAGGAGACATATTCTTACAGGATAAAATGGTGATTTATGACAACGAGAAAAAGCAGATTGGATGGGTTGCTGCAGTATGTGATAGGCCTCCCAAGTAA	1275	0.4682	MDVKSRGIAFAFFFLGFSAIFLLGFSAANQPRFIGRPATSACSNRIGSSVVFRVQGNVYPLGYYSVSLNIGNKVFELDVDTGSDLTWVQCDAGVPCKGCTKPRDQLYKAKNLVHCVDKLCAGVQSSESQSSHHCHSPNDQCDYEVEYADHGSSLGVLVRDFVPLRLTNGSVQRPNVAFGCGYDIEHSGSGATSAPSTAGVLGLGNGNASVLSQLSSMGVVRNVVGHCFSSRGGGFLFFGDGVVPSSAISWTPLPPGSSVKHYISGPVDLLFNGKPTSVKGLQVIFDSGSSYSYFNSQAYQALLNTIIGDLKGKQLTRTTADRSLPICWKGAKPFKSLTDVTNFFKPLTLSFTNTRNLQLQLPPPSYLILTKYGNVCLGILNGAEAGLGNINIIGDIFLQDKMVIYDNEKKQIGWVAAVCDRPPK	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g0925	424	Pfam	Xylanase inhibitor C-terminal	281	414	IPR032799	-
	Bisa05g0925	424	Pfam	Xylanase inhibitor N-terminal	64	240	IPR032861	-
	Bisa05g0925	424	FunFam	Aspartyl protease family protein	40	240	-	-
	Bisa05g0925	424	PRINTS	Pepsin (A1) aspartic protease family signature	391	406	IPR001461	GO:0004190\|GO:0006508
	Bisa05g0925	424	PRINTS	Pepsin (A1) aspartic protease family signature	68	88	IPR001461	GO:0004190\|GO:0006508
	Bisa05g0925	424	PRINTS	Pepsin (A1) aspartic protease family signature	283	294	IPR001461	GO:0004190\|GO:0006508
	Bisa05g0925	424	Gene3D	Acid Proteases	40	240	IPR021109	-
	Bisa05g0925	424	ProSiteProfiles	Peptidase family A1 domain profile.	64	415	IPR033121	-
	Bisa05g0925	424	SUPERFAMILY	Acid proteases	56	421	IPR021109	-
	Bisa05g0925	424	Gene3D	Acid Proteases	245	421	IPR021109	-
	Bisa05g0925	424	FunFam	Aspartic proteinase Asp1 isoform A	244	423	-	-
	Bisa05g0925	424	ProSitePatterns	Eukaryotic and viral aspartyl proteases active site.	77	88	IPR001969	GO:0004190\|GO:0006508
	Bisa05g0925	424	ProSitePatterns	Eukaryotic and viral aspartyl proteases active site.	283	294	IPR001969	GO:0004190\|GO:0006508
	Bisa05g0925	424	PANTHER	ASPARTYL PROTEASES	55	413	IPR001461	GO:0004190\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g0925	Bisa-ChrBisa05	15886174	15890062	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g0925	48	424	Miscellaneous Gene Families	AT1G44130	58.793	6.55e-156	445

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa05g0925	05	15886174	15890062	Bisa05g0925	05	15886174	15890062	ECH