Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0915 ATGCCAGCTTCCCCTTCAGAAAACCGAACCAAATGGAGGAAGCGCAAGAGGGAACCCCAAATTAGCAGGAGGCAACAGAAGCACGAGGACGATGACGACGAGGAGGAAGACCCCAATGGCGAAGACGACCACCTCGAGCGCGAGGATGACTCCGAGGACCAATCCCAGCACCCTAACCCCCAATCCGGTTCGAATTCTCAAGCGCATCTCGAGATCGAGGTCTTGTCCGACGATGGAGTCCAAATTTCGCAGTTCCCTAGAGTGATCAAGCGCACTGTTAATCGCCCTCATACATCCGTCATGGCAATTGTGGCTTTGGAGCGAGCCATCGAGTCTGGAGACAACAAGGGTCAGTTGCAGAATTCGCCATTTTTGGAGAATGTGTCGCATGGGCAGCTTCAGGCGCTGTCCTCCGTGCCTGCCGATAGTTCAGCTTTGGATCAGGACCGAAATGATGGAAGTAATTCGTCTTATGTGATCACCCCACCCCCCGTATTGGAAGGCCGTGGCATTGTTAAGCGGTTTGGGAGTCGGGTTCTTGTTGTTCCAATGCATTCAGAATGGTTTTCCCCGGCCACAGTGCATCGACTTGAGAGACAAGTGGTGCCACGTTTTTTCTCTGGAAAATCACCAGATCATACTCCAGAGAAGTACATGGAATGTAGAAATTATATTGTTGCACGATACATGGAGGACCCAGGGAACAGGATTACAGTTTCTGATTGCCATGGATTGTTAGTTGGGGTTGATAATGAAGATTTAACTCGAATTTTCCGCTTCCTCGATCACTGGGGAATCATCAATTACTGTGCTCAGGTGCCAAGTCATGAGCCTTGGAATGATGAATCCTATCTGAAGGATGAGACAAGTGGTGAGATCCATGTGCCATCAGATGCCTTAAAATCCATAGATAGCTTGATCAAATTTGACAAGTCCAAGTGTAAACTCAAAGCAGATGAAATTTATTCATCATTGACAACTCATAATGCTGATATATCTGATTTGGAGGACAGAATAAGAGAGCATCTATCTGAGAATCATTGCAATTATTGTTCTCGTCCTCTTCCTGTTGTATACTATCAGTCACAAAAGGAGGCTGATATTATACTCTGCTCAGATTGCTTCCATGATGGGAGATTTGTTGTCGGTCATTCAAGTATAGATTTTATAAGGGTAGACTCAACAAGGGATTATGGTGATCTAGACGGGGATAGTTGGACTGATCAAGAAACATTGATGTTGCTTGAGGCGATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGTATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGAAAACTGGAAAATGTCAATGTTCCAAGAATGTCATTGTCATCCAATATGTCAAATAGAGATGACTGTGGCAGATCCCATTCAAATTTACAGGGAGATTTAGCAGGATCTACACAGAACATTGATCCTGGCAGCAGGCTTACTTTTGCTAATTCTGATAATCCTGTTATGGCTCTGGTTGCCTTTTTGGCCTCTGCTGTTGGACCGAGAGTAGCTGCTGCTTGTGCTCATGCAGCATTAGCAGAATTGTCAGGGGATAATTCTGGTAATATGTCACAGGCAGAAGCACCAGGGCATGGTAACAGGATTAACTTGGAAAGCACACATAGTAGAGATGGTGGTCCTCTTGGAGAAATTGCAAACACAAGTCAGCAAAGCGAGGATGAGGCAAAAGTACTTGGTTCACGGGGTCCAAATGAGGGTGAGGCCACCACCCTATCTGCTCAGAAAGTTAAAGATGCTGCTAAAGCAGGCTTGTCTGCTGCAGCAATGAAAGCTAAACTATTTGCCGATCATGAAGAAAGAGAAATTCAGAGGCTATGTGCTAATATTATTAATCACCAGTTGAAAAGATTGGAATTGAAGCTCAAGCAGTTTGCTGAAATTGAAACGTTGTTGATGAAAGAATGTGAGCAAGTGGAGAAGACAAGGCAAAGGTTTGCTGCTGAACGTTCCCGCACTGTATCAGCATGGCTTGGATCTGGTGCAGCCACAAACACATCAGGTGTTGGTCCTTCCACGGTTAACAACAATAATGGCAACAGTAGGCCGCAAATGACCTTTGGTTCTCCTTCACAGCCTAGTGTCTCGGGATTTGGCAGTGGCCAACCGGTTCATCCACATATGTCCTTTGTCCCTCGGCCTTCCATGTTTGGTTTAGGTCAAAGGTTACCGCTTTCTATGATACAACAATCACAATCAACTTCTAGTCCTATGTTCAAAGCCCCCGGTAGTGTGCAGCCTACTACCAATCATCCATTGTTGAGGCCTGTATCAGGTACTAACTCTGGTTTAGGTTAA 2373 0.4526 MPASPSENRTKWRKRKREPQISRRQQKHEDDDDEEEDPNGEDDHLEREDDSEDQSQHPNPQSGSNSQAHLEIEVLSDDGVQISQFPRVIKRTVNRPHTSVMAIVALERAIESGDNKGQLQNSPFLENVSHGQLQALSSVPADSSALDQDRNDGSNSSYVITPPPVLEGRGIVKRFGSRVLVVPMHSEWFSPATVHRLERQVVPRFFSGKSPDHTPEKYMECRNYIVARYMEDPGNRITVSDCHGLLVGVDNEDLTRIFRFLDHWGIINYCAQVPSHEPWNDESYLKDETSGEIHVPSDALKSIDSLIKFDKSKCKLKADEIYSSLTTHNADISDLEDRIREHLSENHCNYCSRPLPVVYYQSQKEADIILCSDCFHDGRFVVGHSSIDFIRVDSTRDYGDLDGDSWTDQETLMLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENVNVPRMSLSSNMSNRDDCGRSHSNLQGDLAGSTQNIDPGSRLTFANSDNPVMALVAFLASAVGPRVAAACAHAALAELSGDNSGNMSQAEAPGHGNRINLESTHSRDGGPLGEIANTSQQSEDEAKVLGSRGPNEGEATTLSAQKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIINHQLKRLELKLKQFAEIETLLMKECEQVEKTRQRFAAERSRTVSAWLGSGAATNTSGVGPSTVNNNNGNSRPQMTFGSPSQPSVSGFGSGQPVHPHMSFVPRPSMFGLGQRLPLSMIQQSQSTSSPMFKAPGSVQPTTNHPLLRPVSGTNSGLG 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0915 790 MobiDBLite consensus disorder prediction 536 594 - -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 687 731 - -
Bisa05g0915 790 Gene3D - 186 273 IPR036388 -
Bisa05g0915 790 PANTHER SWI/SNF COMPLEX-RELATED 386 675 - -
Bisa05g0915 790 Coils Coil 325 345 - -
Bisa05g0915 790 SUPERFAMILY Homeodomain-like 403 456 IPR009057 -
Bisa05g0915 790 FunFam SWI/SNF complex subunit SMARCC2 isoform c 186 274 - -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 140 160 - -
Bisa05g0915 790 CDD SANT 405 447 IPR001005 -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 687 724 - -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 1 66 - -
Bisa05g0915 790 Pfam Myb-like DNA-binding domain 405 447 IPR001005 -
Bisa05g0915 790 ProSiteProfiles Zinc finger ZZ-type profile. 343 397 IPR000433 GO:0008270
Bisa05g0915 790 FunFam SWI/SNF complex subunit SMARCC2 isoform C 402 452 - -
Bisa05g0915 790 ProSiteProfiles SANT domain profile. 401 452 IPR017884 -
Bisa05g0915 790 Pfam SWIRM-associated region 1 608 678 IPR032451 -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 753 790 - -
Bisa05g0915 790 Gene3D - 402 452 - -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 31 49 - -
Bisa05g0915 790 Pfam SWIRM domain 183 269 IPR007526 GO:0005515
Bisa05g0915 790 ProSiteProfiles SWIRM domain profile. 180 278 IPR007526 GO:0005515
Bisa05g0915 790 SMART sant 402 450 IPR001005 -
Bisa05g0915 790 SUPERFAMILY Homeodomain-like 179 272 IPR009057 -
Bisa05g0915 790 MobiDBLite consensus disorder prediction 536 559 - -
Bisa05g0915 790 ProSiteProfiles Myb-like domain profile. 398 448 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0915 Bisa-ChrBisa05 15751111 15759840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0915 348 444 EF-hand Containing Proteins AT3G07740 33.019 2.07e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0915 05 15751111 15759840 Bisa05g0915 05 15751111 15759840 ECH