Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0239 ATGGCTCTCCCTCAGCACCACTTTCAACAACACTACCAACCCCAGCCACAACAACCACAATCGAAATCGTTCAGAAATTTACAAACAGTAGATGGTCAGATGTCGCAGCCGGTTGCCTTCTATAACAGCGCTGATTTGCAAGATCAGACTCAGCATCCTCCGTACGTTCCTCCCTTTCATGTTGTTGGGTTTGCGCCTGGTCCATTTCCTCCTGCTGATGGCAGCGACGGTGGGGCTGATTTGCGGTGGAATTATGGGTTGGAGCCCGAGAGGAAAAGACTAAAAGAACAGGATTTTCTGGAGAACAATTCTCAGATATCTTCCATAGACTTCCTGCAAACCCGATCAGTCTCCACTGGGTTGGGCTTGTCGCTTGACAATACCCGCATGGCTTCTACCGGAGACTCCGCTTTATTATCACTCATTGGTGAAGATATTGAACGTGAGTTACAGCAGCAGGAAGCAGAGATACAAAGGCATCTTAGAATGCAGGGTGAACGTTTGCGGCAAGCTATTTTGGAAAAGGTTCAGGCAACACAACTTCAGAGTATATCAATGGTGGAAGAAAAAGTCCTACAGAAACTTCATGAGAAAGAAGCTGAGGTCGAAAGCATTAATAAGAGGAATATGGAACTTGAAGAGCGAATGGAGCAGTTGACTGTTGAAGCAGGTGCCTGGCAACAGCGTGCCAGATACAATGAGAACATGATTGCTGCTCTCAAGCTTAATCTTCAGCAAGTATATGTTCAAGGCAGAGATAGCAAAGAAGGATGTGGCGACAGTGAGGTAGATGATACAGCTTCATGTTGCAATGGCCGTTCTATTGATTTTCACCTGCTCTCCAAGGACAACAATGATAAGAAAGAGATGATGACTTGTAAGGTGTGCAGAGTCAATGAAGTGAGCATGCTTTTATTACCATGTAAGCACCTCTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTTTGTCCCTTGTGTCAATCCTCTAAATTCATTGGCATGGAGGTCATCAGAAGTCTCTGGATTGTAGCCCATTTGGCCTTCTACTCATATGATATGATCATGAGGCAAAGGCAGGCACAGGCTCAGGCTCAGTGA 1101 0.4541 MALPQHHFQQHYQPQPQQPQSKSFRNLQTVDGQMSQPVAFYNSADLQDQTQHPPYVPPFHVVGFAPGPFPPADGSDGGADLRWNYGLEPERKRLKEQDFLENNSQISSIDFLQTRSVSTGLGLSLDNTRMASTGDSALLSLIGEDIERELQQQEAEIQRHLRMQGERLRQAILEKVQATQLQSISMVEEKVLQKLHEKEAEVESINKRNMELEERMEQLTVEAGAWQQRARYNENMIAALKLNLQQVYVQGRDSKEGCGDSEVDDTASCCNGRSIDFHLLSKDNNDKKEMMTCKVCRVNEVSMLLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVIRSLWIVAHLAFYSYDMIMRQRQAQAQAQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0239 366 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 91 337 IPR017066 -
Bisa05g0239 366 Pfam Zinc finger, C3HC4 type (RING finger) 291 329 - -
Bisa05g0239 366 Coils Coil 188 229 - -
Bisa05g0239 366 FunFam Baculoviral IAP repeat containing 7 302 333 - -
Bisa05g0239 366 PIRSF SBP1_RNase_bind 10 340 IPR017066 -
Bisa05g0239 366 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g0239 366 Gene3D - 302 329 - -
Bisa05g0239 366 Coils Coil 143 163 - -
Bisa05g0239 366 Gene3D - 149 166 - -
Bisa05g0239 366 CDD mRING-HC-C3HC5_CGRF1-like 292 327 - -
Bisa05g0239 366 ProSiteProfiles Zinc finger RING-type profile. 293 328 IPR001841 -
Bisa05g0239 366 MobiDBLite consensus disorder prediction 8 24 - -
Bisa05g0239 366 Gene3D Death Domain, Fas 167 301 IPR011029 -
Bisa05g0239 366 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 274 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0239 Bisa-ChrBisa05 3795482 3800051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0239 293 329 Miscellaneous Gene Families AT2G21380 48.649 9.32e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0239 05 3795482 3800051 Bisa05g0239 05 3795482 3800051 ECH