Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0167 ATGGATCCATCTATAGTGAAGCTTCTTGAAGATGACGAGGATGAAACGATGCATTCAGGGGCGGATGTGGAAGCCTTCCAGGCTGCCTTAAATAGAGACATAGGAGGAGAGGCTTCTACTTCTCAGCCTTCTGGTACAGACACAGTTTTGTCTCAAGGAAGCAGTAACACATTCAGTCAGCCATTGCCACAGTGGCCGACATCTAGCCATGACAATCAAACTGACAGTCAAACTCAACAAGACCCTAAAATTGCACAGAAGCAAGAACAACCTTCATCTGGGATGGAGATGAAACAACATGGATCTCTTGTGGAACAACTACAAAATGTTGCTTCTCAGGATGTAAATCATCCTCCTTTGTCACAGAAACAACCTCAAGATGAATGTCACCGAGCGCAGACTGTACAAGGTTCCCTCCAAAATCCTCAAACTACTGGAATCCCAAATCCTGGAAAAGATCCAATTCTTAATAATGAGCCAGTCAAAACACACAATCCCAACAATGAATCTCAATATTTTAAGTTGCAGCAGATGAGTAATCAACAGGCAACAGTCAATGAGCAGCCAAGCAGCCAAATAAATCGTAGTAAACAGGTACCATTTGGCCTGTTGCTGCCTATCTTGCTTCCGCAGCTTGCGAAAGACAGAGCCATGCAACTCCAAACTTTGTTTGCTAAATTGAAGAAAGATGAAATTCCAAAAGATAATTTTGTGAGGCTGATGAAAGGCATTGTAGGAGACCAGGTGCTTAGATTGGCATTAGCAAAACTGCAATCACAGACAAGATCCAACCAAGGACCTGTTGGGCAGCACCCTATGAGGATGCCCACTGTTACTTCAGGCGCAACGCAATTTAATGATCCCCATGCATTAGCACAACTGCATCAGAGAAGTGCAAACACTCCTGCAGATCAATCCCATATTATTTCTTCAAGTGCCCATGTAAAGAATGAATCAATTTATCCAACTATGGATAACAATGCTAAAAAATCTCAGGAATTGGATGTTAAGGTGGAACCTCAAGCAATGCAACCAAGCCAGTTGCCATCCTCCAGTTCCAACTCTGTTAGTCAAGAAGCAGAAAGGTCCTCAATGCACATACAAGGGCTTAATAAGCAGCAGCAACAACATCTGCATTTTTCATCAGCATATGGTAGTAATTATAACCCTTATTCTAGCACGACTAGTAGTTCCACAACATCTTTCAAAACACAGCCACATGATTCACATTTGAGGCAAATTCCACAGCAAAACATTGGTCCAAATCACTTAGGGGGGGCAACACAGGGTATGAATGTGATTGGCATGACAAAACTTGATAGACAGAATTCTATCAATGATCCTAAGAAACTGCCAGGAGGATCTGCCTCTCCAGTTGTAAATAATACAGGGTCCCAACAAACAGCTAATGCTTGGCAACCATCAACAAATAAAGAACAAAGTTCAGGCATGTTGTCATCAGTTTCCTATGTCAAAAAGGAACCCAATGACCTTTCTACTGAGCAGCAACATAGACATCATTTGTCTAAATTGCATGGGCTGCCTTCTGCTAACACTGCCCAGATTGAACATGGAAATGCCAATCAAGGAACTTCGAAGGATGAGTTTACAAGAGGTCTTCCTGCATCTGCAAGCATGCCACCTACAACTTCTTCTAGCTTGTTGCCCTCTAATTCTGCTTTGCCTTCTGTCATTGCTCAACTTGATCCAAGTGTCCCGTTAAGCTCTCAGTTTCAATCAAACTCTTCTGGGATAAATGCAAGGGCGCCTCTGAAAAAGCCTTCTGTTGGCCAGAAGAAACCACTTGAAGCACTTGGTTCCTCACCACCTCCTCCAAGTAAGAAACAGAAAGTATCTGGGGCTTCTTTGGAGCAGAGCATTGAACAGCTTAATGATGTTACTGCTGTTAGTGGAGTTGATCTTAGGGAGGAGGAAGAACAGTTATTTTCAGTGCCCAAAGAGGACAGTCGAATTTCAGAAGCATCTCGAAGAGTTGTGCAAGAAGAAGAAGAAAGGCTATTACTGCAGAAGGGTCCATTGCAGAACAAATTGATTGAAATTATGGCCAGGTGTGGCTTGAAGGGTATGGGCAATGATGTGGAGAAATGCTTGTCCCTGTGTGTGGAGGAAAGAATGCGTGGACTGATAAGTAACCTAATTAGACTGTCAAAACAGAGAGTTGATTTTGAGAAGACCAGACACCGGGTTGTTGTCACCTCAGATGTTCGGCAACAAATCATGACAATAAATAAGAAAGCAAAGGAAGAGTGGGAGAAAAAACAGGCGGAGGCAGAGAAGCTTCGTAAACTTAATGAAGGCGAGAGTAATCCTGAAGTTGATGGCGACAAGGATGAGAGTCGTAATAAAGCTACCAAGGCAAATAAAGAAGAGGATGACAAGATGAGGACAACTGCTGCAAATGTTGCTGCTCGAGCTGCTGTTGGGGGAGATGACATGCTGTCAAAATGGCAACTTATGGCTGAGCAAGCCCGTCAGAAACGTGAAGGGGTGATGGACACATCATCAAGTTCTCAACCAGCTAAAGATGTGAGCCGCAAACCTTCATCGTCATCTGGAAGAAGTACAAAGGATAGTCAAGATGGGGAGAAAAGAGGATCAGCTTCTCTCGCAACTTCTGGGGCTGCTAAAAAACTTGGGAGAAATCAGGTCATTGCACCTCAAACTCGGGTAGATCGTAGTATCTCTGTTAAGGATGTAATTGCAGTCCTGGAAGGGGAACCACAGATGTCCAAATCACCACTGATGTATCGCTTATACGAGAGAATTCATTCTGATGCCCCTGCTGATTTGTAG 2814 0.435 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGEASTSQPSGTDTVLSQGSSNTFSQPLPQWPTSSHDNQTDSQTQQDPKIAQKQEQPSSGMEMKQHGSLVEQLQNVASQDVNHPPLSQKQPQDECHRAQTVQGSLQNPQTTGIPNPGKDPILNNEPVKTHNPNNESQYFKLQQMSNQQATVNEQPSSQINRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDNFVRLMKGIVGDQVLRLALAKLQSQTRSNQGPVGQHPMRMPTVTSGATQFNDPHALAQLHQRSANTPADQSHIISSSAHVKNESIYPTMDNNAKKSQELDVKVEPQAMQPSQLPSSSSNSVSQEAERSSMHIQGLNKQQQQHLHFSSAYGSNYNPYSSTTSSSTTSFKTQPHDSHLRQIPQQNIGPNHLGGATQGMNVIGMTKLDRQNSINDPKKLPGGSASPVVNNTGSQQTANAWQPSTNKEQSSGMLSSVSYVKKEPNDLSTEQQHRHHLSKLHGLPSANTAQIEHGNANQGTSKDEFTRGLPASASMPPTTSSSLLPSNSALPSVIAQLDPSVPLSSQFQSNSSGINARAPLKKPSVGQKKPLEALGSSPPPPSKKQKVSGASLEQSIEQLNDVTAVSGVDLREEEEQLFSVPKEDSRISEASRRVVQEEEERLLLQKGPLQNKLIEIMARCGLKGMGNDVEKCLSLCVEERMRGLISNLIRLSKQRVDFEKTRHRVVVTSDVRQQIMTINKKAKEEWEKKQAEAEKLRKLNEGESNPEVDGDKDESRNKATKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGVMDTSSSSQPAKDVSRKPSSSSGRSTKDSQDGEKRGSASLATSGAAKKLGRNQVIAPQTRVDRSISVKDVIAVLEGEPQMSKSPLMYRLYERIHSDAPADL 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0167 937 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 14 930 IPR045144 GO:0005669|GO:0006352
Bisa05g0167 937 MobiDBLite consensus disorder prediction 524 555 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 828 897 - -
Bisa05g0167 937 ProSiteProfiles RST domain profile. 192 263 IPR022003 -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 341 429 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 115 152 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 443 486 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 343 425 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 34 102 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 764 803 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 10 102 - -
Bisa05g0167 937 Coils Coil 750 772 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 574 622 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 574 588 - -
Bisa05g0167 937 Gene3D Histone, subunit A 674 720 IPR009072 GO:0046982
Bisa05g0167 937 CDD TAF4 625 924 IPR007900 GO:0005669|GO:0006352
Bisa05g0167 937 Pfam Transcription initiation factor TFIID component TAF4 family 630 925 IPR007900 GO:0005669|GO:0006352
Bisa05g0167 937 MobiDBLite consensus disorder prediction 260 284 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 836 862 - -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 115 151 - -
Bisa05g0167 937 FunFam Transcription initiation factor TFIID subunit 4B 673 720 - -
Bisa05g0167 937 Pfam RCD1-SRO-TAF4 (RST) plant domain 195 258 IPR022003 -
Bisa05g0167 937 MobiDBLite consensus disorder prediction 456 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0167 Bisa-ChrBisa05 2551289 2559010 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0167 05 2551289 2559010 Bisa05g0167 05 2551289 2559010 ECH