Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0113 ATGGTAGATCAACGCACGTTCGGTTGGATCCTCTGCTCTATGCTCGGCCTCGTTGCGCTTTACCGTCTGGTTTTTGCCAGGAAAAACCGCATCGTTTCCTCCGAGTCGCCGTCTCAGTGCATGAAGAGTATAACCACCGCTTCTGGAGAATGCAGATCCACTACCCACGACGGCGAGGTCGACGTCATCATCGTCGGAGCTGGTGTTGCTGGCTCTGCTCTGGCTCACACTCTTGGCAAGGATGGACTCAGAATACATATTATTGAAAGAGATCTGAGTGAGCCTGACCGAATTGTTGGGGAGTTGTTACAACCTGGGGGCTATCTCAAACTGATTGAGCTTGGACTTGAAGATTGTGTGCAGGAAATTGATGCTCAGAAGGTGTTTGGTTATGCTCTTTTCAAGGATGGAAAAAACACTAGACTTTCTTATCCGTTGGAGAAGTTTCACTCAGATGTTTCGGGAAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGGGAGAAGGCTGCCTCCCTTCCCAATGTACTAATGGAGCAAGGAACAGTTACTTCCCTACTCGAAGAAAATGGGACAATTAAAGGTGTGAACTACAAGAATAAAGATGGCCAAGAGTTTGCTGCATATGCTCCTCTTACCATTGTTTGTGATGGGTGTTTCTCAAACTTGCGTCGTTCTCTTTGTAACCCTAAGGTAGACATTCCATCTTGTTTTGTTGGTTTGATTCTGGAGCACTGTGAACTTCCATATGCAAACTATGGGCATGTTGTACTAGCAGATCCTTCACCAATTTTGTTCTATCCCATAAGTGGTACTGAGATTCGCTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCTTCAATTTCAAACGGCGAAATGGCCAAGTATTTGAAGACAGTGGTAGCTCCACAGATTCCCCCTGAGCTCTATGATGCCTTCATAGCCGCAGTGGACAAAGGCAACGCAAGGACAATGCCAAACAGAAGCATGCCCGCATCTCCTTATCCTACTCCTGGTGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTAACGGGGGGCGGAATGACTGTGGCCTTGTCTGATATAGTTGTGCTCCGGGATCTTCTCAGGCCTTTGTGTGACCTAACTGATTCATACACACTCTGCAAATATCTTGAGTCCTTTTATACATTACGGAAGCCCGTGGCATCCACCATAAATACTTTGGCAGGAGCCCTTTACAAGGTTTTTAGTGCATCTTCTGATCAAGCGAGGAGTGAAATGCGCCAAGCCTGCTTTGATTATTTAAGTCTTGGAGGTGTTTTCTCGGAAGGACCAATCTCTTTACTTTCAGGATTAAACCCCCGTCCCTTAAGCTTGGTTCTTCATTTCTTTGCTGTTGCAATATACGGTGTTGGCCGTTTGTTGATTCCATTTCCCTCGCCTTATCGGATTTGGATCGGAGCACAATTAATATCTGGTGCTTCAGGAATCATCTTCCCCATAATCAAGGCGGAAGGAGTTCGGCAGATGTTCTTCCCTGCGACAGTTCCAGCTTATTACAGAAGTCCTCCGTCCAAGTAA 1575 0.4654 MVDQRTFGWILCSMLGLVALYRLVFARKNRIVSSESPSQCMKSITTASGECRSTTHDGEVDVIIVGAGVAGSALAHTLGKDGLRIHIIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVQEIDAQKVFGYALFKDGKNTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVLMEQGTVTSLLEENGTIKGVNYKNKDGQEFAAYAPLTIVCDGCFSNLRRSLCNPKVDIPSCFVGLILEHCELPYANYGHVVLADPSPILFYPISGTEIRCLVDVPGQKVPSISNGEMAKYLKTVVAPQIPPELYDAFIAAVDKGNARTMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLLRPLCDLTDSYTLCKYLESFYTLRKPVASTINTLAGALYKVFSASSDQARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSPYRIWIGAQLISGASGIIFPIIKAEGVRQMFFPATVPAYYRSPPSK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0113 524 PANTHER SQUALENE MONOOXYGENASE 9 522 IPR040125 GO:0004506|GO:0016126
Bisa05g0113 524 Gene3D - 56 364 IPR036188 -
Bisa05g0113 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 - -
Bisa05g0113 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 369 - -
Bisa05g0113 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 - -
Bisa05g0113 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Bisa05g0113 524 Pfam NAD(P)-binding Rossmann-like domain 64 90 - -
Bisa05g0113 524 Pfam Squalene epoxidase 211 483 IPR013698 GO:0004506|GO:0016020|GO:0050660
Bisa05g0113 524 FunFam Squalene monooxygenase 2 54 434 - -
Bisa05g0113 524 SUPERFAMILY FAD/NAD(P)-binding domain 60 434 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0113 Bisa-ChrBisa05 1704177 1709040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0113 42 523 Miscellaneous Gene Families AT1G58440 80.165 0.0 815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0113 05 1704177 1709040 Bisa05g0113 05 1704177 1709040 ECH