Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0077 ATGGTTGTGTTTGCTTCTTGTAATGCAGTCAGTGTAAATGAAGTGGAGGCACTGTATGAGCTGTTTAAGAAGTTAAGTAGCTCGATCATTGATGATGGCTTGATTCATAAGGAGGAGCTTCAGTTGGCACTATTTCAAACCCCACATGGAGAAAATCTTATCCTGGATCGAGTTTTTGATCTTTTTGATGAAAAGAGAAATGGTGTCATCGAGTTTGAGGAATTTGTCCATGCACTCAGTGTTTTTCATCCCTATGCTCCAGTAGAAGAAAAAATTGATTTTGCATTTAGGTTGTACGATATGAGGCAAACTGGTTATATTGAGCGAGAAGAAGTGAAGCAGATGGTTATAGCCATCTTGATGGAATCTGACATGAACTTGTCAGATGATCTCGTTGAAGCTATTGTTGACAAGACATTTGCAGATGTTGATAAGGATCTTGATGGTAGAATTAGTAAAGAGGACTGGAATGATTTTGTGAGACGAAATCCGTCCCTCTTGGACAACATGACACTTCCATATTTGAAGGATATCGCCACTTTGTTTCCAAGTTTTATTTTGGAGACAGAGTATGGAGCTTTACGCTAA 588 0.3878 MVVFASCNAVSVNEVEALYELFKKLSSSIIDDGLIHKEELQLALFQTPHGENLILDRVFDLFDEKRNGVIEFEEFVHALSVFHPYAPVEEKIDFAFRLYDMRQTGYIEREEVKQMVIAILMESDMNLSDDLVEAIVDKTFADVDKDLDGRISKEDWNDFVRRNPSLLDNMTLPYLKDIATLFPSFILETEYGALR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0077 195 ProSiteProfiles EF-hand calcium-binding domain profile. 131 166 IPR002048 GO:0005509
Bisa05g0077 195 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Bisa05g0077 195 Pfam EF-hand domain pair 89 155 IPR002048 GO:0005509
Bisa05g0077 195 SUPERFAMILY EF-hand 7 184 IPR011992 -
Bisa05g0077 195 CDD EFh 91 161 IPR002048 GO:0005509
Bisa05g0077 195 Pfam EF hand 55 80 IPR002048 GO:0005509
Bisa05g0077 195 FunFam calcineurin B-like protein 3 1 192 - -
Bisa05g0077 195 PANTHER CALCINEURIN B 4 190 IPR045198 GO:0005509|GO:0019722|GO:0019900
Bisa05g0077 195 PRINTS Recoverin family signature 151 171 - -
Bisa05g0077 195 PRINTS Recoverin family signature 105 123 - -
Bisa05g0077 195 PRINTS Recoverin family signature 58 79 - -
Bisa05g0077 195 ProSiteProfiles EF-hand calcium-binding domain profile. 87 122 IPR002048 GO:0005509
Bisa05g0077 195 SMART efh_1 135 163 IPR002048 GO:0005509
Bisa05g0077 195 SMART efh_1 54 82 IPR002048 GO:0005509
Bisa05g0077 195 SMART efh_1 91 119 IPR002048 GO:0005509
Bisa05g0077 195 Gene3D - 3 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0077 Bisa-ChrBisa05 1173462 1175167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0077 10 190 EF-hand Containing Proteins AT5G24270 65.746 3.91e-85 248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0077 05 1173462 1175167 Bisa05g0077 05 1173462 1175167 ECH