Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g3579 ATGAGAGGCTATCCAGAATCTCATCCTCACTCGGTTTCACGAGTCACAGCCACACATCCTCTTCCTGTCGGGCGCTTCTTAAAATTAAAACATTATATTGAACCTGAAAACACTCCCTCAACTCTGTTGATTTCTCCACACTACCACCACCCACCTTGTTTCAGAGCACTCACTTCATACATGGCTTCGGCTACTCTTTCTGTAGCCAAACCAGCTCTCCAGGCGAATGCGAAGGGCTTCTCTGACTTCTCTGGCCTCCGCAACTCATCAGGCTACCTTCCTTTTCCTAAGAAATACTCTGAGGACTTCCATTCAGTCATTTCCTTCCAGACCTCAGCAGTTGGAAGCAGCGGAGGGTACAAAAAAGGAGTAGTGGAAGCAAAACTGAAGGTAGCAATCAATGGATTCGGTAGGATTGGAAGGAACTTCTTGAGATGTTGGCACGGTCGCAAGGACTCTCCTCTGGAGATCATTGCCATCAACGACACCGGAGGTGTGAAGCAAGCCTCTCACCTTCTCAAGTACGACTCCACCCTCGGAATCTTCGAGGCTGACGTCAAGCCTGCCGGCGAAAACGGCATCTCCGTGGATGGAAACGTCATCAAGGTCGTCTCCAACCGCAACCCCTCCAACCTACCCTGGAAGGAGTTGGGGATAGATTTGGTGATAGAAGGAACAGGGGTGTTCGTGGACAGAGAAGGAGCGGGGAAGCACATTCAAGCCGGAGCCAAGAAGGTGCTCATCACAGCCCCCGGCAAAGGAGACATCCCAACCTACGTGGTCGGTGTCAATGCTGACGCTTACAACCCAGACGAACCCATCATCAGCAACGCTTCCTGCACCACCAACTGCCTCGCTCCTTTCGTCAAGGTCCTCGATCAGAAATTTGGCATTATCAAGGGCACCATGACGACGACTCACTCGTATACCGGAGACCAGAGGCTGCTGGACGCGAGCCACCGTGACCTGAGGCGAGCGAGAGCGGCTGCTCTGAACATTGTGCCGACGTCAACAGGAGCAGCGAAGGCGGTGGCGCTGGTGCTGCCGACTCTGAAGGGGAAGCTGAACGGGATAGCGCTGCGTGTGCCGACGCCGAACGTGTCAGTGGTGGACCTTGTGGTGCAGGTGTCGAAGAAGACGTTCGCGGAGGAGGTGAACGCTGCCTTCAGGGAAAGCGCAGACAAGGAGTTGAACGGGATTCTGTCTGTGTGCGACGAGCCGCTTGTGTCGGTGGACTTCAGGTGCACGGACGTGTCCTCCACTGTGGACTCCTCGTTGACAATGGTGATGGGAGATGACATGGTGAAGGTGATCGCTTGGTATGACAATGAGTGGGGATACTCCCAAAGGGTTGTGGATTTGGCTGACATTGTTGCCAACAACTGGAAGTGA 1392 0.5381 MRGYPESHPHSVSRVTATHPLPVGRFLKLKHYIEPENTPSTLLISPHYHHPPCFRALTSYMASATLSVAKPALQANAKGFSDFSGLRNSSGYLPFPKKYSEDFHSVISFQTSAVGSSGGYKKGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLEIIAINDTGGVKQASHLLKYDSTLGIFEADVKPAGENGISVDGNVIKVVSNRNPSNLPWKELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADKELNGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g3579 463 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 285 441 IPR020829 GO:0016620
Bisa03g3579 463 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 280 442 - -
Bisa03g3579 463 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 130 231 IPR020828 GO:0051287
Bisa03g3579 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 296 IPR036291 -
Bisa03g3579 463 SMART gp_dh_n_7 129 280 IPR020828 GO:0051287
Bisa03g3579 463 Gene3D - 130 455 - -
Bisa03g3579 463 Gene3D Dihydrodipicolinate Reductase; domain 2 279 443 - -
Bisa03g3579 463 FunFam Glyceraldehyde-3-phosphate dehydrogenase 279 443 - -
Bisa03g3579 463 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 278 285 IPR020830 GO:0016620
Bisa03g3579 463 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 397 412 IPR020831 GO:0016620
Bisa03g3579 463 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 274 292 IPR020831 GO:0016620
Bisa03g3579 463 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 301 317 IPR020831 GO:0016620
Bisa03g3579 463 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 238 251 IPR020831 GO:0016620
Bisa03g3579 463 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 357 374 IPR020831 GO:0016620
Bisa03g3579 463 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 130 453 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Bisa03g3579 463 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 128 463 IPR020831 GO:0016620
Bisa03g3579 463 FunFam Glyceraldehyde-3-phosphate dehydrogenase 129 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g3579 Bisa-ChrBisa03 72982520 72985617 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g3579 03 72982520 72985617 Bisa03g3579 03 72982520 72985617 ECH