Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2637 ATGTTGGATGATGTTAAGGGTGGTAATGGTCATAGGGACGGAGTTGGCAATGGCATACAGAGAGAAAAAGAGACACAACAGTTACACAAAGAGGGAAAAATGAGAGAAATAATAAGCATTCATATTGGACAAGCTGGAATTCAGGTCGGGAATTCATGTTGGGAGCTTTATTGCCTCGAACATGGAATTCAGCCTGATGGCACGATGCCTAGTGATACCTCAGTTGGCGCCGCACATGATGCTTTTAACACCTTCTTTAGTGAAATTGGTTCTGGCCAGCATGTGCCAAGGGCTATATTTGTTGATCTGGAACCTACTGTTATTGATGAAGTAAGGTCTGGTGCTTACAGACAACTCTTTCATCCCGACCAACTAATATCTGGCAAGGAAGACGCTGCTAATAATTTTGCAAGAGGACATTATACTGTCGGAAAGGAAGTTGTTGACCTATGCCTTGATCGTGTCAGAAAATTAGCAGACAATTGCACTGGCTTGCAAGGGTTCTTAGTTTTCAACGCTGTTGGTGGTGGCACTGGTTCTGGTTTGGGATCATTGCTTTTGGAACGATTATCTGTAGATTACGGGAAGAAGTCGAAACTTGGCTTCACCATTTATCCCTCTCCTCAGGTATCTACTGCAGTCGTTGAACCTTACAACAGCGTTCTCTCCACTCATTCTCTCCTTGAGCACACTGACGTAGCTGTGCTTTTGGACAATGAAGCTATATATGATATCTGCAGAAGATCATTGGATATCGAAAGGCCAACTTACATGAATTTGAATCGCTTGATATCTCAAATTATCTCTTCCTTAACTACTTCATTGAGATTTGATGGTGCAATTAATGTGGATATTACTGAGTTCCAGACCAACCTTGTGCCATATCCTCGAATCCATTTTATGCTCTCATCTTATGCTCCTGTTATCTCAGCTGTAAAAGCCTACCATGAGCAGCTATCGGTGCCTGAGATCACCAGAGCTGTCTTTGAGCCATCAAGTATGATGGCTAAGTGTGATCCGAGACATGGAAAATACATGGCATGTTGCCTGATGTACCGTGGAGATGTTGTGCCCAAAGATGTAAATGCTGCTGTCTCGACCATCAAGTCAAAGCGAACTGTTCAGTTTGTTGACTGGTGTCCTACCGGTTTCAAATGTGGTATTAATTACCAGCCTCCAACAGTGGTACCAGGAGGTGATCTTGCCAAGGTGCAGCGTGCGGTTTGTATGATAAGCAACAATACAGCTGTGGCTGAGGTTTTCTCTCGTATCGACCACAAATTTGATCTCATGTATGCAAAGCGGGCATTTGTCCATTGGTATGTTGGTGAAGGAATGGAAGAAGGTGAATTCTCAGAAGCCCGAGAGGATCTCGCTGCTCTTGAAAAGGACTATGAAGAAGTTGGGGCAGAAGGTGTGGATGCAGAAGAAGATTACTGA 1440 0.4375 MLDDVKGGNGHRDGVGNGIQREKETQQLHKEGKMREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGAAHDAFNTFFSEIGSGQHVPRAIFVDLEPTVIDEVRSGAYRQLFHPDQLISGKEDAANNFARGHYTVGKEVVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYMNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAVKAYHEQLSVPEITRAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKSKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGVDAEEDY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2637 479 FunFam Tubulin alpha chain 34 301 - -
Bisa03g2637 479 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 175 181 IPR017975 GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 FunFam Tubulin alpha chain 417 469 - -
Bisa03g2637 479 SUPERFAMILY Tubulin nucleotide-binding domain-like 34 277 IPR036525 -
Bisa03g2637 479 Gene3D - 302 416 IPR037103 -
Bisa03g2637 479 SUPERFAMILY Tubulin C-terminal domain-like 279 469 IPR008280 -
Bisa03g2637 479 CDD alpha_tubulin 35 468 - -
Bisa03g2637 479 Gene3D Helix hairpin bin 417 469 IPR023123 -
Bisa03g2637 479 Pfam Tubulin/FtsZ family, GTPase domain 36 246 IPR003008 GO:0005525
Bisa03g2637 479 PRINTS Tubulin signature 167 185 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 141 165 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 186 207 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 128 139 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 225 245 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 43 63 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 86 105 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 211 224 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Tubulin signature 413 441 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 418 434 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 181 193 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 194 205 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 455 471 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 51 66 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 307 322 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 354 375 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 121 134 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 153 161 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 393 412 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 247 259 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 78 91 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 PRINTS Alpha-tubulin signature 380 393 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa03g2637 479 MobiDBLite consensus disorder prediction 1 31 - -
Bisa03g2637 479 Gene3D Tubulin/FtsZ, GTPase domain 34 301 IPR036525 -
Bisa03g2637 479 FunFam Tubulin alpha chain 302 416 - -
Bisa03g2637 479 SMART Tubulin_C_4 281 426 IPR018316 -
Bisa03g2637 479 PANTHER TUBULIN 35 471 IPR000217 GO:0005874|GO:0007017
Bisa03g2637 479 Pfam Tubulin C-terminal domain 296 425 IPR018316 -
Bisa03g2637 479 SMART Tubulin_4 82 279 IPR003008 GO:0005525
Bisa03g2637 479 Coils Coil 451 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2637 Bisa-ChrBisa03 40596288 40602172 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2637 03 40596288 40602172 Bisa03g2637 03 40596288 40602172 ECH