Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2628 ATGCTTGTTTCAATATATAGGAACCAGGAGGAAATGGCTAAAATTCTTATGTTTCTGGTGGGGCTTTGGCTTTTATGTGGCTGGGCATTTTTGTCAGTGCCAAAATACATCAAGTATAAAGACCCAAAGCAGTCGATTGATATTCGGGTGAAGGACCTTTTAAGTCAAATGACTCTTGAGGAGAAGATTGGCCAGATGTTGCAGATTGAGCGCAAGGTTGCGTCTGCTGATGTGATGAAGAAGTATTTCATTGGAAGTGTAATGAGCGAGGGAGGGAGTCGTCCGGCCCCACGGGCTTCTGCAGAAGCTTGGATTGACATGGTGAATGATTTTCAAAGGGGTGCTTTATCAACCCGGCTTGCTATCCCAATGATTTATGGAATTGACGCTGTCCATGGCCATAATACGATTTACAAAGCAACTATCTTTCCCCACAATATTGGACTTGGAGCTACCAGGGACCCAGACCTTGTGAAGCGAATAGGAGTTGCCACTGCCCTTGAAGTTCGAGCCACTGGAATACCATATGTTTTTGCACCTTGTATAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATCCTAAATTAGTACAAGAGATGACTCAAATTATATCAGGATTGCAAGGAGATATTCCTGATTACTTGCCCAAGGGTGTCCCTTTCCTTGACGGCAAAGAGAAGGTTATAGCATGTTCTAAGCACTATGCGGGTGATGGTGGAACAACTTATGGAATTGATGAGAGCAACACAGCTATAGATAAAGATGGATTGATGAGAATTCACATGCCAGGCTACCTAGTCTCAATTAGCAAGGGTGTGGCAACAGTCATGGTTTCATATTCTAGTTGGAATGGAGTAAAAATGCACACTAACCGTGATCTCATTACTGGATTCCTCAAGAATATCCTCCGTTTCAAGGGCTTTGTTATCTCGGACTTTGAAGGTATAGACAGGATCACCTCTCCACCTCATGCAAATTATACTTATTCTATTGAAGCTGGAGTTAATGCTGGCATTGACATGTTCATGGTTCCAAAGAAATATACAGAATTCATAGATGGTGTAACCAGACTGGTGAAAAATAACGTCATTCCTTTGAGTCGAATTGATGATGCTGTGAAAAGAATTTTATGGGTTAAGTTCATGATGAATCTTTTTGAGAATCCATTGGCTGATTACAGCTTGGTTAAATATCTGGGAATTCAGGAGCATAGAGAATTGGCTAGGGAGGCTGTAAGGAAATCAATGGTCCTACTAAAAAACGGGAAATCTGCCGGGAAGCCATTGCTACCTCTTCCTAAAAGGGCGTCAAAAATACTTGTAGCTGGAAGCCATGCAGATAATCTAGGCTATCAATGTGGTGGCTGGACTATTGAGTGGCAAGGAGTCAGCGGGAACAATTTTCTTGAAGGGACTACAATTCTCAGTGCTATTAAAAAGACTGTTGATCCAGAGACCGAAGTGATCTACAAGGAGAGCCCTGATATAGAATATATGAAGCTCAATGAATTCTCCCATGCCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGGATGGTGACAGCAAGAACTTAACAATTCCCGATCCTGGCCCCGAGACCATCACAAATGTTTGTGGAGTTATAAAATGTGTGGTTATCATAATCTCGGGTCGCCCTATAGTTATTGAACCATATGTTGCTTTAATAGATGCTCTTGTTGCTGCTTGGCTTCCGGGAAGTGAGGCCCAGGGTGTGGCTGATGTTTTATTTGGGGACTATTGTTTCACAGGAAAGCTTCCACGAACATGGTTCAAAACTGTTGATCAACTGCCTATGAATGTTGGGGATCCTCATTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCCACCAAACTTACTAAAGCCACTTATTCTGTCTCTTAG 1932 0.426 MLVSIYRNQEEMAKILMFLVGLWLLCGWAFLSVPKYIKYKDPKQSIDIRVKDLLSQMTLEEKIGQMLQIERKVASADVMKKYFIGSVMSEGGSRPAPRASAEAWIDMVNDFQRGALSTRLAIPMIYGIDAVHGHNTIYKATIFPHNIGLGATRDPDLVKRIGVATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKLVQEMTQIISGLQGDIPDYLPKGVPFLDGKEKVIACSKHYAGDGGTTYGIDESNTAIDKDGLMRIHMPGYLVSISKGVATVMVSYSSWNGVKMHTNRDLITGFLKNILRFKGFVISDFEGIDRITSPPHANYTYSIEAGVNAGIDMFMVPKKYTEFIDGVTRLVKNNVIPLSRIDDAVKRILWVKFMMNLFENPLADYSLVKYLGIQEHRELAREAVRKSMVLLKNGKSAGKPLLPLPKRASKILVAGSHADNLGYQCGGWTIEWQGVSGNNFLEGTTILSAIKKTVDPETEVIYKESPDIEYMKLNEFSHAIVVVGEHPYAEMDGDSKNLTIPDPGPETITNVCGVIKCVVIIISGRPIVIEPYVALIDALVAAWLPGSEAQGVADVLFGDYCFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTKLTKATYSVS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2628 643 SUPERFAMILY (Trans)glycosidases 36 422 IPR017853 -
Bisa03g2628 643 Gene3D - 33 407 IPR036962 GO:0004553|GO:0005975
Bisa03g2628 643 Pfam Glycosyl hydrolase family 3 C-terminal domain 423 632 IPR002772 GO:0004553|GO:0005975
Bisa03g2628 643 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 36 637 - -
Bisa03g2628 643 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 33 407 - -
Bisa03g2628 643 PRINTS Glycosyl hydrolase family 3 signature 143 162 IPR001764 GO:0004553|GO:0005975
Bisa03g2628 643 PRINTS Glycosyl hydrolase family 3 signature 119 135 IPR001764 GO:0004553|GO:0005975
Bisa03g2628 643 PRINTS Glycosyl hydrolase family 3 signature 305 323 IPR001764 GO:0004553|GO:0005975
Bisa03g2628 643 PRINTS Glycosyl hydrolase family 3 signature 235 251 IPR001764 GO:0004553|GO:0005975
Bisa03g2628 643 PRINTS Glycosyl hydrolase family 3 signature 189 205 IPR001764 GO:0004553|GO:0005975
Bisa03g2628 643 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 423 632 IPR036881 GO:0004553|GO:0005975
Bisa03g2628 643 FunFam Glycosyl hydrolase family protein 408 634 - -
Bisa03g2628 643 Pfam Glycosyl hydrolase family 3 N terminal domain 58 384 IPR001764 GO:0004553|GO:0005975
Bisa03g2628 643 Gene3D - 408 635 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2628 Bisa-ChrBisa03 40378940 40382603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2628 9 634 Glycoside Hydrolase AT5G20950 67.891 0.0 880
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2628 03 40378940 40382603 Bisa03g2628 03 40378940 40382603 ECH