Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2626 ATGTTGACCGAAGCGACTACTCGTAGGAGCCGAGTCTTGTGCGTTAAGATTTCTCTTTGGTCCATGAACTATTCTGGTAGTTGTCAATGGCTCCTGCGACTTGTTTGTATACATAATAAGCATGGTGATGATGATGATGTTGATGGAGGGCTAGTTCTTATGGATGTAACTGGTTCTCCACAAGCATTTCAGACACCTGGTCGCAAAATTTCATCTTCCAATTCCCATAAAGATGTTTGGTTTGTTGTGCGTGAAGGATCGTTGAATGATGTTGAGTTAGCCTTGGCACTATTGAAGAAGAATGGAGTTGATATCAATTCAAGGAACACCTTTGGGCTTACTCCTTTTCATATTGCAACTTGGAGGAACCACATCCCCATTGTCAGGAGGCTTCTTGCAGCTGGTGCAGACCCTTATGCTCGAGATGGAGAATCAGGATGGTGTAGCCTTCACAGGGCTCTGCATTTTGGTCATCTCGCTGTAGCAAGCATCCTTCTTCAGCATGGTGCCTCTATTACGTTGGAGGACTCTAAATCTCGAATACTTGTAGATCTCTTATCTGGCCCTGTATTTCACGCTTTCAGAAATGAGTGTAATTCAGCTACTACTGAGGTCTTTAGTTGGGGAAGTGGCACAAACCTCCAGCTTGGAACTGGAAATGCACATATTCAAAAGTTACCATGCAAGGTTGATTCACTTAGTGGCTCTTACATAAAGTTGCTTTCTGCTGCGAAGTTCCACAGTGTGGCTGTCACAGCTCGTGGGGAAGTGTATACTTGGGGATTTGGAAGGGGGGGCCGTCTAGGTCACCCTGATTTTGACATCCACAGTGGTCAAGCTGCAATTATCACTCCCCGTCAGGTGACTTCTGGTCTGGGTGCCCATCGAGTGAAGGCAATTGCTGCTGCTAAGCATCATACTGTTATTGCTACAGAAGGTGGGGAAGTGTTCACTTGGGGATCGAATAGAGCAAACAAACACATAGCTGTAGTTTCCAACTTAGGTGAAATTTTTACTTGGGGTTGCAATAGAGAGGGTCAACTTGGTTATGGCACCTCAAACTCAGCATCTAATTACACCCCACGTGTAGTTGAATACTTGAAGGGGAGGACTTTGGCTGGAGTTTCTGCTGCAAAATATCATACGGTTGTATTAGGATCTGATGGAGAGTTTCACCGCATGGAACGACTTCATGTAGTTTCCATAGCTGCAGGAATGGTACACAGCATGGCACTTACAGATGATGGTGCCTTGTTCTATTGGGTCTCCTCAGATCCTGATCTTAAATGCCAACAGCTATATGCAATGTGTGGAAGAAATATGGTGGGCATATCTGCTGGAAAGTACTGGAGTGCAGGGTTTGCAGCTATAGGTGATGTTTATATGTGGGATGGAAAGAAACGTAAGGAAAAGCCTCCTGTTGCAACTCGGTTACCCGGTGTAAACAGGGCTACTTCAGTTTCTGTTGATTGTATTCTGTATTTCCGCTTAAAAAGCCTTTGTGAAAAAGTTGCTGCAAATTGTCTACTGGAGCCACGAAATGCCATTCAATTGCTTGAGATTGCTGATTCTCTAGGAGCGAATGATTTAAAGAAATATTGTGAGGAGATTGTCATGCGCAACCTTGATTATATCCTTACAATTTCATCACATACTGTGGCAAGTACTTCATTAGATATTCTGGCTAACCTTGAGAGGGCATTAGACCAGAGATCATCTGAGACATGGAGTCACCGCCGGCTCCCTACTGTGACTGCTACTTTTCCAGCCATCATAAACAGTGAAGAGGATGATAGTGAGATAGAGTTTCACAGGACTCGGGACAAACCAATGGAATTGAAGTTGGAAAAGGACCCAAGAATATATTCGTTTCTACAGCCTAAGGATGACCCCAGTCAAGAAAACTCGAAAGTTGTCCGAGCTCTAAGGAAGAAGTTACAGCAGATTGAGATGCTAGAAGTCAAACAATCTAAAGGACATCATCTTGATGACCAGCAGATTGCAAAGATTCAATGTAAGTCAGCTCTGGAGAGGTCACTTGCTGAGCTAGGTGTTCCTGTTGGAACTTCACAGAACAAAGAATCATCTTCTGTACAGCCTGTAGGGAAAGGCAGTAAAAAGGGTAAACTTTCAAGAAAACAGAGAAAGATGAGCAAACCAAGTGTGGTGCATAATAAAGTGGAATCTGTTAATATTGGAAAAAAAGTGCCATCAGAACCTACAAAGGACATGTTGGACATTGAAATCTTGGAGGTTTCTGACTTGAAGGTGGAAGATTCTCTGTGTGAACAAACTACTACTGACAAAGGCACAAAAGACTCGGTGGTTATTGTTCAGAAGAAAGACAACTTAAATTTGCTAAAGGCTAAGGGTCAATCTCCGAAGGTTTCTAAGAAGAAGAGCAAGAAGGGTGGCCTTTCAATGTTTTTAAGTGGTGCTCTCGATGATGCCCCAAAAGAAGTGGCTCCCCATCCAACACCACCAAGAAATGAGGGTCCCGCATGGGGTAGGGCCAAGTTCTCGAAGGGTTCTGCTTCTCTTCGTGAAATCCAGGTTGAGCAGAGCAAAACTAAAGAAATCCAGCCAACTAGGGACAGAGATGAGGGGGAAGATCTTTGTGATAGTGGCAGTTGGAGGAAAGTACGGCTGAGTTCACTTATTCTTTCCAGCCCAATACCCATTGCCTCGGCTCGCGGTTCTCCAACATCTGATGGAGAAAGAAGGGCTGCTTCAGGAACCCCACCTCAACTCTCAAGACCATCTTTTAGGGACATCCAAATGCAACAGGTGAGAAAACTTCAGAGTCTTCCCCATAGTCCAAAGACTAGAACAGCTGGATTTGCTGTTTCTACCAGTCAAGGCTCGCCATCCGAAGCTTCCGGGATGAACCGCTGGTTCAAGCCTGACATGGAGTTACCATCCTCAATTAGTTCTATTCAGATTGAGGAAAAGGCCATGAAGGATCTCAAGCGCTTCTACAGCAGCGTTAAGATTATCAAAGCATATGTTAAGGCTGGCTAA 3021 0.4439 MLTEATTRRSRVLCVKISLWSMNYSGSCQWLLRLVCIHNKHGDDDDVDGGLVLMDVTGSPQAFQTPGRKISSSNSHKDVWFVVREGSLNDVELALALLKKNGVDINSRNTFGLTPFHIATWRNHIPIVRRLLAAGADPYARDGESGWCSLHRALHFGHLAVASILLQHGASITLEDSKSRILVDLLSGPVFHAFRNECNSATTEVFSWGSGTNLQLGTGNAHIQKLPCKVDSLSGSYIKLLSAAKFHSVAVTARGEVYTWGFGRGGRLGHPDFDIHSGQAAIITPRQVTSGLGAHRVKAIAAAKHHTVIATEGGEVFTWGSNRANKHIAVVSNLGEIFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGRTLAGVSAAKYHTVVLGSDGEFHRMERLHVVSIAAGMVHSMALTDDGALFYWVSSDPDLKCQQLYAMCGRNMVGISAGKYWSAGFAAIGDVYMWDGKKRKEKPPVATRLPGVNRATSVSVDCILYFRLKSLCEKVAANCLLEPRNAIQLLEIADSLGANDLKKYCEEIVMRNLDYILTISSHTVASTSLDILANLERALDQRSSETWSHRRLPTVTATFPAIINSEEDDSEIEFHRTRDKPMELKLEKDPRIYSFLQPKDDPSQENSKVVRALRKKLQQIEMLEVKQSKGHHLDDQQIAKIQCKSALERSLAELGVPVGTSQNKESSSVQPVGKGSKKGKLSRKQRKMSKPSVVHNKVESVNIGKKVPSEPTKDMLDIEILEVSDLKVEDSLCEQTTTDKGTKDSVVIVQKKDNLNLLKAKGQSPKVSKKKSKKGGLSMFLSGALDDAPKEVAPHPTPPRNEGPAWGRAKFSKGSASLREIQVEQSKTKEIQPTRDRDEGEDLCDSGSWRKVRLSSLILSSPIPIASARGSPTSDGERRAASGTPPQLSRPSFRDIQMQQVRKLQSLPHSPKTRTAGFAVSTSQGSPSEASGMNRWFKPDMELPSSISSIQIEEKAMKDLKRFYSSVKIIKAYVKAG 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2626 1006 ProSiteProfiles Ankyrin repeat region circular profile. 145 176 - -
Bisa03g2626 1006 ProSiteProfiles Ankyrin repeat profile. 111 143 IPR002110 GO:0005515
Bisa03g2626 1006 Pfam Ankyrin repeats (3 copies) 91 176 IPR002110 GO:0005515
Bisa03g2626 1006 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 255 313 IPR000408 -
Bisa03g2626 1006 Gene3D - 59 189 IPR036770 -
Bisa03g2626 1006 SUPERFAMILY Ankyrin repeat 88 184 IPR036770 -
Bisa03g2626 1006 Gene3D - 326 497 IPR009091 -
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 893 966 - -
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 706 720 - -
Bisa03g2626 1006 PRINTS Chromosome condensation regulator RCC1 signature 204 220 IPR000408 -
Bisa03g2626 1006 PRINTS Chromosome condensation regulator RCC1 signature 257 273 IPR000408 -
Bisa03g2626 1006 PRINTS Chromosome condensation regulator RCC1 signature 375 391 IPR000408 -
Bisa03g2626 1006 PRINTS Chromosome condensation regulator RCC1 signature 335 351 IPR000408 -
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 906 960 - -
Bisa03g2626 1006 SUPERFAMILY RCC1/BLIP-II 204 463 IPR009091 -
Bisa03g2626 1006 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 203 254 IPR000408 -
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 686 702 - -
Bisa03g2626 1006 PANTHER BTK-BINDING PROTEIN-RELATED 66 325 - -
Bisa03g2626 1006 Pfam Regulator of chromosome condensation (RCC1) repeat 204 251 IPR000408 -
Bisa03g2626 1006 Pfam Regulator of chromosome condensation (RCC1) repeat 335 385 IPR000408 -
Bisa03g2626 1006 Pfam Regulator of chromosome condensation (RCC1) repeat 255 309 IPR000408 -
Bisa03g2626 1006 SMART ANK_2a 145 174 IPR002110 GO:0005515
Bisa03g2626 1006 SMART ANK_2a 111 140 IPR002110 GO:0005515
Bisa03g2626 1006 ProSiteProfiles Ankyrin repeat region circular profile. 111 142 - -
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 686 726 - -
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 852 874 - -
Bisa03g2626 1006 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 335 388 IPR000408 -
Bisa03g2626 1006 Gene3D - 198 325 IPR009091 -
Bisa03g2626 1006 ProSiteProfiles Ankyrin repeat profile. 145 177 IPR002110 GO:0005515
Bisa03g2626 1006 MobiDBLite consensus disorder prediction 790 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2626 Bisa-ChrBisa03 40308815 40319147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2626 84 185 Acyl Lipid Metabolism Gene Families AT5G53470 34.615 7.86e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2626 03 40308815 40319147 Bisa03g2626 03 40308815 40319147 ECH