Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2423 ATGAAGCTCATAAATATTAACCCCAAAAACATCAAGCTCAGCCCCAAACGCCTTTTCCGCTCCAAGAAGGAGCCCTCCGTCGTCTCTAGATCCGATCCCTCGTCCTTCAGTTCCGGCACTTCGTCCTCTTCCTCAGATGGCTCCACGCACAACCACAAGGCCGCCAGAACCCCTACCAGTGTCTTGCCTCATGTTTCGGGTGAGTGGTCTGATATCTCGGCCGAATTTCATTCCGATTTGGCTCTAGCGTTCAAGCTGATAGACCGTGATAATGACGGCATCGTCTCGCGGGAGGAGCTCGAGGCGTTGCTGACTCGGCTCGGATCCCAGCCGCCGAGCCAGGAGGAGGTTGCGATGATGCTCTGCGAGGTGGACCACGAGGGCCGGGGGTGCATCAGCGTCGAGGCGCTCATGAACCGGATCGGGACTGCGTGCGAGCCCGTCGCCGACTCTGACGACCTCAGGGAGGCGTTCGAGGTGTTCGACACCGACCACGACGGAAGAATCTCGGCGGAGGAGCTGTTGAGGGTTTTCAAGGCCATCGGGGACGAGCGGTGCACGTTAGAGGAATGCCGGCGCATGATAGAAGGCGTGGACAGGAACGGGGACGGGTTCGTGTGCTTCGACGACTTTTCGCGTATGATGGAGCTGCAGAGATGA 660 0.5879 MKLININPKNIKLSPKRLFRSKKEPSVVSRSDPSSFSSGTSSSSSDGSTHNHKAARTPTSVLPHVSGEWSDISAEFHSDLALAFKLIDRDNDGIVSREELEALLTRLGSQPPSQEEVAMMLCEVDHEGRGCISVEALMNRIGTACEPVADSDDLREAFEVFDTDHDGRISAEELLRVFKAIGDERCTLEECRRMIEGVDRNGDGFVCFDDFSRMMELQR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2423 219 ProSitePatterns EF-hand calcium-binding domain. 88 100 IPR018247 -
Bisa03g2423 219 CDD EFh 153 215 IPR002048 GO:0005509
Bisa03g2423 219 SUPERFAMILY EF-hand 67 215 IPR011992 -
Bisa03g2423 219 FunFam Calmodulin, putative 74 140 - -
Bisa03g2423 219 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Bisa03g2423 219 MobiDBLite consensus disorder prediction 28 56 - -
Bisa03g2423 219 MobiDBLite consensus disorder prediction 15 62 - -
Bisa03g2423 219 ProSiteProfiles EF-hand calcium-binding domain profile. 186 219 IPR002048 GO:0005509
Bisa03g2423 219 Gene3D - 70 143 - -
Bisa03g2423 219 Pfam EF-hand domain pair 153 215 IPR002048 GO:0005509
Bisa03g2423 219 Pfam EF-hand domain pair 80 135 IPR002048 GO:0005509
Bisa03g2423 219 SMART efh_1 190 218 IPR002048 GO:0005509
Bisa03g2423 219 SMART efh_1 153 181 IPR002048 GO:0005509
Bisa03g2423 219 SMART efh_1 79 107 IPR002048 GO:0005509
Bisa03g2423 219 SMART efh_1 116 144 IPR002048 GO:0005509
Bisa03g2423 219 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Bisa03g2423 219 Gene3D - 144 219 - -
Bisa03g2423 219 ProSiteProfiles EF-hand calcium-binding domain profile. 75 110 IPR002048 GO:0005509
Bisa03g2423 219 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 153 216 - -
Bisa03g2423 219 FunFam Probable calcium-binding protein CML35 141 219 - -
Bisa03g2423 219 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2423 Bisa-ChrBisa03 35999973 36000632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2423 12 215 EF-hand Containing Proteins AT2G41410 55.825 7.49e-66 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2423 03 35999973 36000632 Bisa03g2423 03 35999973 36000632 ECH