Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2213 ATGGATAATCAAAGTGATTTCACGAAAGGGAAATTCACATGGACGATTCAAAACTTCTCCAAGTTGAGGTCTAAGAAGCGATACTCCAAGACTTTCATTGTGGACGGTTATCCATGGAGGGTTCTTATATTTCCAAAAGGGAACAATGTAAAAGGGAACAATGTGGACTACTTGTCCTTATATTTGGATGTTTTTGATTCTCCGAGTTTACCTTATGGCTGGTCCAGATATGCAGCTTTCAGTTTAGCTGTGATTAATCAAGTTGATATAAAGACGACAGTCAAAAAAGAGACTGAACACGAATTCAGTGCAAGAGAAAGTGATTGGGGTTTCACATCATTTATGCCTCTAAGGGAATTTTATGACCCTAGCAAGGGTTATCTTGTTAAGGATACATGTATCATTGATGTTGAGGTTTCTATTCCCAAGTCTGGAAATGTGAATCAAGTACATGAAGCAGATGGCATAACTGGATCCTTGAAATCTGGTGGTCAAGCTGGACAAATGGAAGTGGAACCCCCACAACAGGAAGATCGAGGGCAAGACTTGAATACTGTCCCACTACCCTCTGCCCAAGCTTCTACTAAGTCTACTGAGCATTCTTATAGCCCTTCTTTACTAACAGAAGTGGCCTCAAACCCAATTGGTGAGCTCATGGATTTCAGGGGTCTAGGTCAAATAGAAAAAGATTTTATTCCACTACTGGAGGAAGTATGTTCAAAGTATCCATGTCTCATTGAAAGCCAGCAAAAGAGGAGTTGTCGGTTTATTGAATGGGCGTTCACAGCTTTGGGCAGAGTTCTACATTTCCTTAAAACTAAAAGGGTGAAAGACATGAATGATGAGGCCTGCGAGCATCTTCAAATTTTATGGGAGGAACTTGAGACATTTAGATTTGATTTAACTTGGCTGGAGCCTCATGTTCAATCTGCCTTAGGCATGAAAAATTATTTGGAGAGGAAAATGCAATTGAAAAAGTTGAGGGGCAACGTCGATGCTTTGAAGATGGAAATGAAGAGGCTTAAGGCAAAGTTGGCTGTTGCAGAGGCAGATCTAGAAATAGCAAGAAGAGACCTAGTGCGAGCAGAAGACGGATTCGAAGAGAGGGATCTGGAAGCTGAACTTGGATATGGTAGACCATAG 1143 0.4112 MDNQSDFTKGKFTWTIQNFSKLRSKKRYSKTFIVDGYPWRVLIFPKGNNVKGNNVDYLSLYLDVFDSPSLPYGWSRYAAFSLAVINQVDIKTTVKKETEHEFSARESDWGFTSFMPLREFYDPSKGYLVKDTCIIDVEVSIPKSGNVNQVHEADGITGSLKSGGQAGQMEVEPPQQEDRGQDLNTVPLPSAQASTKSTEHSYSPSLLTEVASNPIGELMDFRGLGQIEKDFIPLLEEVCSKYPCLIESQQKRSCRFIEWAFTALGRVLHFLKTKRVKDMNDEACEHLQILWEELETFRFDLTWLEPHVQSALGMKNYLERKMQLKKLRGNVDALKMEMKRLKAKLAVAEADLEIARRDLVRAEDGFEERDLEAELGYGRP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2213 380 CDD MATH 10 139 IPR002083 GO:0005515
Bisa03g2213 380 ProSiteProfiles MATH/TRAF domain profile. 9 139 IPR002083 GO:0005515
Bisa03g2213 380 MobiDBLite consensus disorder prediction 155 199 - -
Bisa03g2213 380 SUPERFAMILY TRAF domain-like 7 143 - -
Bisa03g2213 380 Coils Coil 324 365 - -
Bisa03g2213 380 MobiDBLite consensus disorder prediction 178 199 - -
Bisa03g2213 380 Pfam MATH domain 16 141 IPR002083 GO:0005515
Bisa03g2213 380 SMART math_3 11 120 IPR002083 GO:0005515
Bisa03g2213 380 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 355 - -
Bisa03g2213 380 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 7 158 IPR008974 GO:0005515
Bisa03g2213 380 FunFam Ubiquitin carboxyl-terminal hydrolase 13 7 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2213 Bisa-ChrBisa03 32079326 32081440 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2213 03 32079326 32081440 Bisa03g2213 03 32079326 32081440 ECH