Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2192 ATGGGCACCATGGATTCTTTCCTCTGTAATGTTTCCTCTAAGCCATTCTTCCTTTACTTCGCTGCTCTTCTCTTCCTTTCCCTTCTTCCATTCCCCTCCGCATTCCCCCAAAACTCCACCCACAAATTCCCTTCTAATTCTTCTTCCAGCTCCGGTCAGATTAATTCCAACTCCATTCTTGTGGCCCTTCTGGATTCCCATTACACTGAGCTTGCTGAGCTCGTGGAGAAGGCGCTTCTCTTGCAGAAACTCGAGGACACCGTCGGGGTTCACAATATTACCATTTTCGCCCCCCGAAATGAAGCTCTAGAGCATCAGCTCGACCCCGAGTTCAAGCGGTTCCTCCTTGAGCCCGGCAACCTGAAGTCGTTACAGACGCTTTTGATGTATCACATTGTTCCCAAACGAATCGGGTCAAATGACTGGCCCGCCGGGAATTCTGAGGCTGTTCCGCACCAGACCTTGTGCCAAGATCACGTGCATTTGATGAGCAAGGGTCCTGGGAAGAAGATTGTCGGTTTAGCCGAGATTGTTCGCCCCGACGACGTCGTTCGTCCCGACGGTGTGATTCACGGGATTGAGCGGCTGTTGGTTCCGCGATCTGTACAGGAGGATTTCAATCGCAGGAGGAATTTGCGAGACATCTCGGCGGTGCTACCAGAGGGTGCGCCGGAGGTTGATCCCAGAACTCACCGGTTGAAGAAACCCGCGCCGGTACCAGCCGGAGCTCCCCCGGTGTTGCCAATTTACGACGCCATGGCACCCGGTCCATCACTGGCTCCGGCGCCGGCGCCCGGACCCGGTGGGCCACACCACCACTTCAATGGTATGCGCCAGGTCAAAGACTTCATTCATACTCTGTTACATTACGGTGGGTACAATGAAATGGCAGATATCCTGGTTAACTTGACATCTTTAGCCACCGAAATGGGAAGATTAGTCTCAGAGGGTTACGTCTTGACCGTGTTGGCTCCCAACGACGAGGCCATGGCGAAGCTGACCACAGACCAATTGAGTGAACCGGGTGCACCGGAGCAAATAATCTACTACCATATCATACCAGAGTATCAAACAGAGGAGAGTATGTACAATGCCGTGAGGAGGTTTGGGAAGGTTTGGTACGATACGTTGAGGTTGCCACATAAGGTTGTGGCTCAGGAGGCTGATGGGTCTGTGAAATTTGGGCAAGGTGAAGGGTCTGCGTATCTGTTCGATCCTGATATATATACAGATGGGAGGATTTCGGTGCAGGGTATTGATGGGGTTCTCTTCCCACCGGAGGAGGAGTCAAAGACAGAAAGGAAAACAATCCCGGTCGTCAAAGTTGCCGCCAAGCCAAGGAGAGGGAAATTGCTGGAAGTAGCCTGTAGCATGCTTGGGGCCTTTGGACAAGTCTGCTAA 1401 0.5253 MGTMDSFLCNVSSKPFFLYFAALLFLSLLPFPSAFPQNSTHKFPSNSSSSSGQINSNSILVALLDSHYTELAELVEKALLLQKLEDTVGVHNITIFAPRNEALEHQLDPEFKRFLLEPGNLKSLQTLLMYHIVPKRIGSNDWPAGNSEAVPHQTLCQDHVHLMSKGPGKKIVGLAEIVRPDDVVRPDGVIHGIERLLVPRSVQEDFNRRRNLRDISAVLPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGMRQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVWYDTLRLPHKVVAQEADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDGVLFPPEEESKTERKTIPVVKVAAKPRRGKLLEVACSMLGAFGQVC 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2192 466 SMART fasc_3 321 426 IPR000782 -
Bisa03g2192 466 SMART fasc_3 94 200 IPR000782 -
Bisa03g2192 466 ProSiteProfiles FAS1/BIgH3 domain profile. 280 408 IPR000782 -
Bisa03g2192 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 37 466 IPR044654 -
Bisa03g2192 466 SUPERFAMILY FAS1 domain 57 200 IPR036378 -
Bisa03g2192 466 Gene3D FAS1 domain 299 426 IPR036378 -
Bisa03g2192 466 Gene3D FAS1 domain 59 200 IPR036378 -
Bisa03g2192 466 Pfam Fasciclin domain 67 199 IPR000782 -
Bisa03g2192 466 Pfam Fasciclin domain 305 423 IPR000782 -
Bisa03g2192 466 ProSiteProfiles FAS1/BIgH3 domain profile. 55 197 IPR000782 -
Bisa03g2192 466 FunFam Fasciclin-like arabinogalactan protein 16 275 426 - -
Bisa03g2192 466 SUPERFAMILY FAS1 domain 259 427 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2192 Bisa-ChrBisa03 31729041 31731599 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2192 03 31729041 31731599 Bisa03g2192 03 31729041 31731599 ECH