Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2139 ATGGCTTCTCCTCACTTTCTCTCTCTTCTCTCTCTCTTCTCTGTCATCGCCTTCACTTCATCACTTGCATCCTCACCCACCACCATCACTCTTCCTATCTCGCCTTTATTCGCCAAACACCCATCTTCACAAGCAGATCCCTTTGAGACTCTCAAAGTGGTTGCCTCTGCTTCTCTAACAAGAGCCCACCACCTCAAGCACCGAACATCCAATTCCAATTCCTCCCTCGTCAAAACACCTCAAACCCCCAAGAGCTATGGAGGATACTCCGTCGATCTCAATTTCGGAACGCCCCCTCAAACCTTCTCTTTCGTTTTGGACACCGGAAGCAGCCTCGTCTGGTTCCCCTGTTCATCTCGCTACCTCTGTTCCAAATGCTCCTTCCCAAACATCGACATCACCAAGATCCCCAGGTTCATCCCCAAGGATTCGTCCTCTGCCAAGTTCGTAGGCTGCAGAAACCCAAAATGTGGATGGATTTTCGGTCCCGATTCTCAATCTCGATGCCAAGACTGCAAACCCGGTGTCCAGAATTGCTCGCAGATTTGCCCTGCTTATATAGTTCAGTATGGTCTGGGCTCAACTGCCGGATTGTTACTCTCTGAAACTCTGGACCTTCCTGGGAAAAGCATAGCCGATTTTCTCGTCGGATGCTCCATCATGTCGATCCGGCAACCCGCCGGGATAGCCGGGTTCGGTCGCGGCTCTGAGTCGCTACCCTCGCAGATGGGTCTTAAGAGATTCTCTTACTGCTTAATGTCTCACCGGTTTGACGACTCCTCCGAAAGCAGTGACCTCGTTTTGCAGAGTGGCTCCTCTGGCGACACCAAAACCGATGGCCTTAGCTACACGCCGTTTCAGAAATATTCAGCTGCGAATAACTCTGCATTCCTCCAGTACTATTACTTAACCATTCGAAAAATCATCATCGGCGGCAAGCGAGTCAAGATTCCGTCGAAGCTTTTTGAGCCTGATTCAGAGGGTAACGGGGGCTCCATAGTGGACTCTGGATCCACCTTCACGTTCATGGAGAAGCCCATTTTCGCTGCGGTGGCTCAAGAATTCGAGAGACAGATGGCTAATTATACCAGAGTCAAGAATGTGGAAGCCCAATCTGGTTTGAGCCCCTGTTTCGATATTTCAGCTCAGAAGCCGGTTTCTTTCCCGGAATTCACTATCCGATTCAAAGGCGGTTCCAAGATGACATTGCCTTTGGAGAACTATTTTTCCTTCGTGGGCAAATCGGGGGTCGCGTGCTTGACCATTCTCTCTGACAGTGGGGCCGGTCCGGCGATGGCTGGTGGGCCGGCGGTAATTTTGGGAAACTATCAGCAGCAAAATTTCTATGTGGAGTATGACTTGGAAAATGAGAGATACGGATTTCGGCCTCAAACTTGCAAGAAGAGTAGCTAG 1413 0.5032 MASPHFLSLLSLFSVIAFTSSLASSPTTITLPISPLFAKHPSSQADPFETLKVVASASLTRAHHLKHRTSNSNSSLVKTPQTPKSYGGYSVDLNFGTPPQTFSFVLDTGSSLVWFPCSSRYLCSKCSFPNIDITKIPRFIPKDSSSAKFVGCRNPKCGWIFGPDSQSRCQDCKPGVQNCSQICPAYIVQYGLGSTAGLLLSETLDLPGKSIADFLVGCSIMSIRQPAGIAGFGRGSESLPSQMGLKRFSYCLMSHRFDDSSESSDLVLQSGSSGDTKTDGLSYTPFQKYSAANNSAFLQYYYLTIRKIIIGGKRVKIPSKLFEPDSEGNGGSIVDSGSTFTFMEKPIFAAVAQEFERQMANYTRVKNVEAQSGLSPCFDISAQKPVSFPEFTIRFKGGSKMTLPLENYFSFVGKSGVACLTILSDSGAGPAMAGGPAVILGNYQQQNFYVEYDLENERYGFRPQTCKKSS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2139 470 FunFam Aspartyl protease family protein 272 469 - -
Bisa03g2139 470 FunFam Aspartic proteinase nepenthesin-2 62 266 - -
Bisa03g2139 470 Pfam Xylanase inhibitor C-terminal 301 462 IPR032799 -
Bisa03g2139 470 CDD pepsin_A_like_plant 88 466 IPR034161 -
Bisa03g2139 470 PRINTS Pepsin (A1) aspartic protease family signature 438 453 IPR001461 GO:0004190|GO:0006508
Bisa03g2139 470 PRINTS Pepsin (A1) aspartic protease family signature 332 343 IPR001461 GO:0004190|GO:0006508
Bisa03g2139 470 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Bisa03g2139 470 Pfam Xylanase inhibitor N-terminal 89 267 IPR032861 -
Bisa03g2139 470 SUPERFAMILY Acid proteases 85 466 IPR021109 -
Bisa03g2139 470 ProSiteProfiles Peptidase family A1 domain profile. 89 462 IPR033121 -
Bisa03g2139 470 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Bisa03g2139 470 Gene3D Acid Proteases 63 265 IPR021109 -
Bisa03g2139 470 Gene3D Acid Proteases 270 470 IPR021109 -
Bisa03g2139 470 PANTHER OS07G0603500 PROTEIN-RELATED 43 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2139 Bisa-ChrBisa03 30622064 30623476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2139 87 468 Miscellaneous Gene Families AT1G44130 25.791 2.26e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2139 03 30622064 30623476 Bisa03g2139 03 30622064 30623476 ECH