Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2122 ATGCTAGACTCCATTATTCAATGTCATTTAACTTCTTATGCCTTTTTAGAAGGTAAGGTGGCTTTAATAACCGGCGGTGCCAGTGGCATTGGCGAGGCCACCGCAAGGCTCTTCTTCCATCACGGTGCTAAGGTCGTGATAGCTGACGTTCAAGACGAGCTGGGCCGCTCCGTCTGTAACGACATTGGATCCAGATCTGACAGTGACAACCAGAGCATCTCCTATGTCCATTGCGATGTCACAAGCGAATCCGATGTTGAAAATGCAATCAACACAACAATCTCGAAGCATGGCAAGCTTGACATAGCTTTTAGCAACGCAGGCATCTCTGGTAAAGTTGTCAATTCTATCCTCGCCATTGATAAGGAGGAGGTGAAGAGAGTTTTCGAGGTGAACGTGTACGGTGGTTTTCTAGTAGCCAAACACGCCGCTAAGGTAATGATACCGAAAAAGAAAGGGAGCATTATTTTCACGGCGAGCGTGCTGTCCGTGATTCAAGGGCAGTTAGAACCCCATGCTTATGTGGCATCAAAGCATGCAGTGGTGGGTCTCACAAAGAGTCTATGTGCGGAAATGGGAAGGCACGGAATTAGAGTGAACTGCATATCGCCATATGCGGTGGCGACACCTTTGTTGCTCCATGCAACAAGGATGGAGAAGGAAGAAGTCGAGAAAGTGTTTTCGGAAGCAGCAAATTTGAAGGGAGTGGTGCTGAATGGGAAAGATGTGGCAGAAGCGGCTATGTACTTAGCCAGCGATGAGTCCATGTATGTGAGTGGGCTCAACCTTGTAGTCGATGGAGATTTCAGTACCACTAATCCCTCAACAGAATTGGCTTAG 840 0.4774 MLDSIIQCHLTSYAFLEGKVALITGGASGIGEATARLFFHHGAKVVIADVQDELGRSVCNDIGSRSDSDNQSISYVHCDVTSESDVENAINTTISKHGKLDIAFSNAGISGKVVNSILAIDKEEVKRVFEVNVYGGFLVAKHAAKVMIPKKKGSIIFTASVLSVIQGQLEPHAYVASKHAVVGLTKSLCAEMGRHGIRVNCISPYAVATPLLLHATRMEKEEVEKVFSEAANLKGVVLNGKDVAEAAMYLASDESMYVSGLNLVVDGDFSTTNPSTELA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2122 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 IPR002347 -
Bisa03g2122 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 IPR002347 -
Bisa03g2122 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 IPR002347 -
Bisa03g2122 279 PRINTS Glucose/ribitol dehydrogenase family signature 195 212 IPR002347 -
Bisa03g2122 279 PRINTS Glucose/ribitol dehydrogenase family signature 174 193 IPR002347 -
Bisa03g2122 279 PRINTS Glucose/ribitol dehydrogenase family signature 147 163 IPR002347 -
Bisa03g2122 279 PRINTS Glucose/ribitol dehydrogenase family signature 233 253 IPR002347 -
Bisa03g2122 279 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Bisa03g2122 279 PRINTS Glucose/ribitol dehydrogenase family signature 98 109 IPR002347 -
Bisa03g2122 279 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 16 273 - -
Bisa03g2122 279 CDD secoisolariciresinol-DH_like_SDR_c 16 270 IPR045309 GO:0016616
Bisa03g2122 279 Gene3D - 9 278 - -
Bisa03g2122 279 FunFam Short-chain dehydrogenase reductase 11 273 - -
Bisa03g2122 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 269 IPR036291 -
Bisa03g2122 279 Pfam Enoyl-(Acyl carrier protein) reductase 25 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2122 Bisa-ChrBisa03 30390562 30392998 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2122 10 266 Acyl Lipid Metabolism Gene Families AT3G55290 30.888 4.53e-28 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2122 03 30390562 30392998 Bisa03g2122 03 30390562 30392998 ECH