Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1705 ATGATGGTGATGGATAAGGTGACAGAGTATGGGCGAGTGTTTGAGCACTTGGACGGGGACGGAGACGGGAGGATATCGGCGTGGGAGCTGAGGCGGTGCGTGGAGGCGATGGGAGGGGAGATGACGGAGGAGGAGGCGGAGGCGGCGGTGGTGTATTTGGACTGCGACGGGGACGGGGTGGTGGGGGTGGAGGATTTGGTGAGGTTGGTGGAAGGAGGAGAAGAGAAAGAGAAAGACTTAAAAGAGGCGTTCAAGATGTATGAGATGGAGGGGTGTGGGTGTATCACTCCCAATAGTCTCAACAGGATGCTTGGGAGATTGGGTCAGTCCAGAAGCTTAGACGAGTGTAAAGTTATGATCTCTAGGTTTGATCTCAACGGCGATGGGGTCCTCACTTTTGATGAGTTTAGGGTCATGATGCTCTAG 426 0.5423 MMVMDKVTEYGRVFEHLDGDGDGRISAWELRRCVEAMGGEMTEEEAEAAVVYLDCDGDGVVGVEDLVRLVEGGEEKEKDLKEAFKMYEMEGCGCITPNSLNRMLGRLGQSRSLDECKVMISRFDLNGDGVLTFDEFRVMML 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1705 141 Pfam EF-hand domain pair 12 70 IPR002048 GO:0005509
Bisa03g1705 141 FunFam Calcium-binding protein CML38 71 141 - -
Bisa03g1705 141 SUPERFAMILY EF-hand 6 141 IPR011992 -
Bisa03g1705 141 Gene3D - 3 70 - -
Bisa03g1705 141 CDD EFh 9 70 IPR002048 GO:0005509
Bisa03g1705 141 ProSiteProfiles EF-hand calcium-binding domain profile. 111 141 IPR002048 GO:0005509
Bisa03g1705 141 PANTHER CALCIUM BINDING PROTEIN 74 140 - -
Bisa03g1705 141 ProSitePatterns EF-hand calcium-binding domain. 124 136 IPR018247 -
Bisa03g1705 141 ProSiteProfiles EF-hand calcium-binding domain profile. 5 40 IPR002048 GO:0005509
Bisa03g1705 141 Gene3D - 71 141 - -
Bisa03g1705 141 ProSiteProfiles EF-hand calcium-binding domain profile. 75 110 IPR002048 GO:0005509
Bisa03g1705 141 SMART efh_1 115 141 IPR002048 GO:0005509
Bisa03g1705 141 SMART efh_1 9 37 IPR002048 GO:0005509
Bisa03g1705 141 SMART efh_1 79 107 IPR002048 GO:0005509
Bisa03g1705 141 SMART efh_1 45 73 IPR002048 GO:0005509
Bisa03g1705 141 ProSitePatterns EF-hand calcium-binding domain. 18 30 IPR018247 -
Bisa03g1705 141 Pfam EF-hand domain pair 93 140 IPR002048 GO:0005509
Bisa03g1705 141 CDD EFh 79 140 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1705 Bisa-ChrBisa03 23246684 23247109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1705 13 140 EF-hand Containing Proteins AT1G76640 51.128 4.20e-43 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1705 03 23246684 23247109 Bisa03g1705 03 23246684 23247109 ECH