Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1228 ATGGGTTCCAGAGCAGGTGAGTTGACGGTAAACCCTCGCCTTTCAATCTCCCTTAGTTTCAGAACTTCGCTTAATTTTTGTATTGCATCATTTCCAGGAGCAAGTTCCGATGATATATGGTCAGAAATTGTGGCCGCTGATGGACATCATCAACAGCAACAAATTGAGGTGGTTTACAGAAGAAGAAAACCCCCGAACAACCAAAAGGACGTCAACTTAGCTTCCAGAAAGCATTCTGATTCTGGTCTTCCGCGTGCGAGTCGGGTGAGTTTGGTCGATCCAAACAAGCGAGTCAGTTGGAATCGATCTCTATCGACAAGAGGGAGGACAAGTATAGCTGTTGGAGCTTGTATGGTTTACCAGCCGCAATTAAAGAAGGAAAAAAGAAAAGGGAAACCTGCTCTTCCTAAAGGAAGGTTTTTACAACCTCCAAACTTTGAGAAGGAGAAAGCATACTTTGAAGAGGTTGATGCTTTTGAGTTGTTGGAGGAGAGTCCCTCGCCCAAGAAAGTTGGCACATGGACCATAGGCAATGAAAAGGATGATGACAAAATACCACATTTATGCTCAAGATTAGAAAAATGGTTACTGTCCAGGAAATTGAACATCAGTTGTGGTCCCTCAAGCACACTATCTAAGATATTAGATACACCAGTCAGCGGATTGGAAACTATTTATGATATTGATTTAAGTTGTATAAAATTGAAAACTACAGAAAAATCTGTGGAAACCAATCCACATCTGCATAGTAAGGGTCCGTTTGAGGGGGACATCAATTTGCAAAATGTTAAAATATTAGCTCAAGATGATGAAGTTTGTGAAAATATAGAAGCTGCTGTTAAGAAACTCTCTCTGGCATCGACATCAGCTTCAGTAGAAGAACATTATAGTCCATTTGCTGCTTTATTAGCAATTTGTGGACAGTCTGCGCCTTCAAAGTTACAAGACGTGTTCTCTAAGTATTGTGAACCAGAGACTATTGTCAAAGTCGGTGAAGGAACATATGGAGAAGCTTTCAAGATTGGCAGCTACGTTTGCAAAATAGTTCCTATTGATGGGGACTTGAGAGTAAATGGGGAAATCCAAAAGAAATCAGAAGAATTGCTGGAGGAGGTGGTTCTATCTAAAACTCTTAACTATTTGAGGAAAAATGATGGAGATGCTCGTAATTGTTGTGGAACATTCATTGAAACAATAGAATTATCACTCGAGCCTAATGTATCCATGGTTGTCTTTTGGGACAGAATTAGAGTATGCCAAGGTCCCTATGATCCTTCTCTGCTTCGAGCATGGGAAGATTGGGATGAAAAACATGGTTCAGAGAATGATCACCCAAAAGAGTTTCCAGAGAAACAGTGTTATGTGGTGTTAATATTGCAACATGGTGGCAAGGATCTTGAAAGCTTTGTACTTCTGAATTCTGATGAGGCAAGGAGTTTACTGGTTCAGGTCACTGCTGGGCTTGCCGTGGCTGAATCTGCATATGAATTTGAACATCGTGATCTTCACTGGGGAAACATACTTTTAAGTCGAAGTGACTCTGTGAAGTTGCAGTTCACTCTTGATGGCAGACATATGTTTGTTAAAACATATGGATTGTTAATATCTATAATTGACTTTACTCTGTCAAGAATAAACACAGGTGATGATATACTCTTCTTCGATCTTTCCTCAGATCCTGAACTATTTAAAGGTCCAAAAGGGGACAAGCAATCAGAAACATATAGGAAGATGAGGGAGGTAACAGAAGATTGCTGGGAAGGAAGTTTTCCTAGAACAAATGTGTTGTGGCTGATCTACTTGGTTGATATACTGCTGATGAAGAAATCATTTGAACGTACTTCAAAGAATGAGAGAGATCTGCGTTCCTTGAAGAAACGTCTAGACAAATATAATTCAGCCAAGGAAGCAATTTTCGATCCTTTCTTCAGTGACTTGTTCGTTGTTGATCCCTCAAACTTCAAACCCCTCTTTCTACATTCCACTGTCTGTATCAATCTCTTACAATGGCCAGTCCTGCTTCTTTATGCTTCTTCTTTCTCTCTGTCTTCATCCTTCGTTGTTCTGGTGAGAACCCTTGTGGGATTTTCGTATCGTGAAAGAGGGGACACTCGAACGATATCATTCCTCGAACAAAACAAGGTGACTTCATCTCATATTCGAATTTTTGTCAAGGACCCTAGGATTTTGAGCACTCTCTCGAGCTCCCACGAGTCACTAGATTTCTACCTGAACGAAAGCCTTGTCAAAAATTTAGTTAGGTCAAAACCATATGCAGTTTCGTGGCTAAAATCCTATCTCGTGGAATTTCTTCCAAGTGCAGAAATCAAAAGTATCATAGCTAGTTGTGGCAGTTTGGGCCATAATGAGATACCTTTGCTAGTGTCTGCTCTGAAATCTATTCATTCAGTTCTCAGTAAGCTTCGTATGGGCAGGGAAGTGAAGGTCTCAGTAGCATTTCCACTGTCATTTTTATATGAGTTGAGAACATCAAATCAGAATGATCTTCATGGGATCCTCTCATTTATAAAGGAAACCAATTCCTTTGTCATGATAGAAGATAGCATTCATGGGGATTTAGCCATGGGGGATCACATTGTTCAGTCTATTACCAAAATAGCTACTCTTGCTGCTTCTATACTTCCTTACAAAGATGTTCCTTTTGTTCTCACAATCAAGAGCCCAACTATTCCTAGTTCAATAGAAGTAGCTCAATTTAGTGAAAAAGTATCCAAATATCTTGAAGCAACAAGCAATGAGGTTACTGGTAGGATAATTGCATTATATGCAGAAGTACATGCAATAGAGGAAGAGACCTTTCCTTTGTCTCGCAGAGAAATCTTAAGCAAATTCCATATTAGGAGAACTCTAGATGACACAACCAACCCTCCAAACGTAGTTTACCCCACAAATCCAACTTCAGCTACACCAGTGACTACACCCCCTGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGCCACGGTTTCCCCCGCCAATCCAGCTGCAATGCCCGTGACGGTTCCTTCCACAACCCCTGTGCCCTTGACTCCAACAAATCCAGCAAATCCTGGGACAACTCCGATAACAGTTCCGGGAGCACAACCAACAACATATTATCCACCCCCATCAGGGAATGTTCCTGTTGTGAACCCCATTCCACCTCCTTCAGACAATAATGCTCCAGCCACGGCCGGACAAAGCTGGTGTGTGGCCAAGAATGGAGTTCCAGAGACTTCTCTTCAATCGGCTTTGGACTATGCCTGTGGAATGGGTGGTGCAGACTGTTCACAAATCCAGCAAGGTGGGAATTGTTACAATCCAAGTACTCTTCAAAATCACGCTTCTTATGCCTTCAACAGCTACTACCAAAAGAATCCAGCGCCAACAAGTTGTGACTTTGGAGGGGCTGCCACCCTAGTTAACGTGAATCCAAGCTCAGGTTCTTGCATTTATCCATCATCTTCTTCCTCTTCCTCATCGTCAACCTCAATGCCATCATCACCCACAACTACACCATTAACTCCAACTCCAACAACATCAGGGACAGGGGCATCCAGCTATGGCACCCCACCTTCAGTGTTAAATTCAAGCAGCCCTGCCTCAGGTATGGGTACCATGCCAGCTTTTGGGTCCGAAAGCCCTCCTGGTGTAGATACTGCACCATCTTCGCTTTCAACTAGTTTGCAACCTTTTCTACGTTTCATGGTTCTGGTGACAACATTGGTCACTGGAAAACTCAGTATGCGCCCATAG 3762 0.4216 MGSRAGELTVNPRLSISLSFRTSLNFCIASFPGASSDDIWSEIVAADGHHQQQQIEVVYRRRKPPNNQKDVNLASRKHSDSGLPRASRVSLVDPNKRVSWNRSLSTRGRTSIAVGACMVYQPQLKKEKRKGKPALPKGRFLQPPNFEKEKAYFEEVDAFELLEESPSPKKVGTWTIGNEKDDDKIPHLCSRLEKWLLSRKLNISCGPSSTLSKILDTPVSGLETIYDIDLSCIKLKTTEKSVETNPHLHSKGPFEGDINLQNVKILAQDDEVCENIEAAVKKLSLASTSASVEEHYSPFAALLAICGQSAPSKLQDVFSKYCEPETIVKVGEGTYGEAFKIGSYVCKIVPIDGDLRVNGEIQKKSEELLEEVVLSKTLNYLRKNDGDARNCCGTFIETIELSLEPNVSMVVFWDRIRVCQGPYDPSLLRAWEDWDEKHGSENDHPKEFPEKQCYVVLILQHGGKDLESFVLLNSDEARSLLVQVTAGLAVAESAYEFEHRDLHWGNILLSRSDSVKLQFTLDGRHMFVKTYGLLISIIDFTLSRINTGDDILFFDLSSDPELFKGPKGDKQSETYRKMREVTEDCWEGSFPRTNVLWLIYLVDILLMKKSFERTSKNERDLRSLKKRLDKYNSAKEAIFDPFFSDLFVVDPSNFKPLFLHSTVCINLLQWPVLLLYASSFSLSSSFVVLVRTLVGFSYRERGDTRTISFLEQNKVTSSHIRIFVKDPRILSTLSSSHESLDFYLNESLVKNLVRSKPYAVSWLKSYLVEFLPSAEIKSIIASCGSLGHNEIPLLVSALKSIHSVLSKLRMGREVKVSVAFPLSFLYELRTSNQNDLHGILSFIKETNSFVMIEDSIHGDLAMGDHIVQSITKIATLAASILPYKDVPFVLTIKSPTIPSSIEVAQFSEKVSKYLEATSNEVTGRIIALYAEVHAIEEETFPLSRREILSKFHIRRTLDDTTNPPNVVYPTNPTSATPVTTPPDTPTIITVPSTNPATVSPANPAAMPVTVPSTTPVPLTPTNPANPGTTPITVPGAQPTTYYPPPSGNVPVVNPIPPPSDNNAPATAGQSWCVAKNGVPETSLQSALDYACGMGGADCSQIQQGGNCYNPSTLQNHASYAFNSYYQKNPAPTSCDFGGAATLVNVNPSSGSCIYPSSSSSSSSSTSMPSSPTTTPLTPTPTTSGTGASSYGTPPSVLNSSSPASGMGTMPAFGSESPPGVDTAPSSLSTSLQPFLRFMVLVTTLVTGKLSMRP 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1228 1253 Gene3D - 1065 1169 - -
Bisa03g1228 1253 MobiDBLite consensus disorder prediction 1154 1226 - -
Bisa03g1228 1253 Pfam Haspin like kinase domain 275 639 - -
Bisa03g1228 1253 Gene3D Transferase(Phosphotransferase) domain 1 462 643 - -
Bisa03g1228 1253 FunFam Glucan endo-1,3-beta-glucosidase 4 1065 1158 - -
Bisa03g1228 1253 FunFam serine/threonine-protein kinase haspin 462 645 - -
Bisa03g1228 1253 Gene3D Phosphorylase Kinase; domain 1 311 461 - -
Bisa03g1228 1253 Pfam X8 domain 1071 1141 IPR012946 -
Bisa03g1228 1253 Gene3D Glycosidases 694 855 - -
Bisa03g1228 1253 SMART DUF3635_2 560 643 IPR024604 -
Bisa03g1228 1253 FunFam Serine/threonine-protein kinase haspin-like protein 311 461 - -
Bisa03g1228 1253 MobiDBLite consensus disorder prediction 962 982 - -
Bisa03g1228 1253 SUPERFAMILY Protein kinase-like (PK-like) 452 653 IPR011009 -
Bisa03g1228 1253 SMART X8_cls 1070 1154 IPR012946 -
Bisa03g1228 1253 MobiDBLite consensus disorder prediction 1154 1207 - -
Bisa03g1228 1253 ProSiteProfiles Protein kinase domain profile. 324 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1228 1253 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 242 646 - -
Bisa03g1228 1253 MobiDBLite consensus disorder prediction 62 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1228 Bisa-ChrBisa03 16662407 16674233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1228 705 852 Glycoside Hydrolase AT2G05790 26.415 1.05e-09 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1228 03 16662407 16674233 Bisa07g1528 07 38357902 38358795 CCT
Bisa03g1228 03 16662407 16674233 Bisa03g1228 03 16662407 16674233 ECH