Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0910 ATGCGGTGTATCCTACCCACATTTTTGGCCTTAGCCACCGTGCTGCTTCCGGTATCGGTAGTATTCAGTGCATTGCCGGGTAGTTTCCTCCCCCTTGAACGGGCTGTTCCTCTTAGTCAGCGAGTGGAACTGCAAGAACTGAGAGCTCGCGACCGAGCTAGGCATGCTCGAATATTGCAAGATGTGGTTGGTGGTGTTGTCGACTTCTCAGTCAAAGGGATTTCCGATCCTTCCAGTATTGGGTTGTATTATACAAAAGTTAAACTGGGCTCTCCTCCAAGAGAATTTAACGTCCAGATTGATACTGGAAGTGACATCTTGTGGGTTAATTGCAATACCTGCGGTGATTGCCCTCAATCCAGTCAACTGGAGATAGAGCTCAATTTCTTTGATACAGCCAGCTCATCCACAGCTGCGCTGATTTCCTGTTCTGACCCAATATGCACTTCTTCTACTCTCAGTGCGGCAACTGAATGCACCCCTCAGATTAATCAGTGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGGACATCAGGTTATTATGTATCTGATGCGATGTATTTTGACATGATCATCGGACAGTCTATGCTGGTTAACACTTCATCTAAAATTGTTTTTGGGTGTAGCACCTATCAGTCTGGAGATTTGACTAAAACAGATAAAGCAGTGGATGGAATTTTTGGGTTTGGCCCTGGTGCTCTATCTGTTATATCACAATTGTCATCACGAGGCATAACCCCCAAAGTGTTTTCTCACTGTTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATTTTGGAGCCAAGTATTGTTTATAGTCCACTTGTCCCATCACAGCCTCATTACAACTTAAATCTTCAGAGCATTTCTGTCAATGGACAGCTTCTCCCTATTAATTCAGCTGTATTTGCAACATCTAACAACCGAGGAACTATAGTTGACTCTGGCACAACATTGGCATACCTTGTTCAAGAAGCATATGATCCTTTGGTCAATGCGATAACTACCATAGTGTCACAGTACGCCACTTCCATTATTTCAAAAGGAAGCCAGTGTTATTTGGTTTCAGCCAGTGTAGGTGATATATTTCCTCCTGTTAGTTTGAACTTTGCTGGTGGAGCATCCATGGTTTTGAAGCCAGAGCAGTACCTTATGCATAATGGTTTCGTTGATGGTGTTGTAATGTGGTGTATTGGTTTCCAGAAAGTGCAGGAGGGAGTCACAATTTTAGGAGATCTTGTCCTAAAAGATAAGATAGTTGTCTACGACTTAATTCATCAACGAATTGGATGGGCTGACTATGATTGTTCCTTGTCCGTAAATGTCTCTGTCACTACGAGCAGGGATGAGTACGTCACTGCAGGACAGTTAAGCGTGAGCAGCTCAGAGCTAGGCATTCTTACCAAGTTGCTACCTTTAAGCTTTGTAACCCTTTTTATGCACATAATAGTTAGAGTAAATGGAAATCTCATTAGCTCATGCCTGACAGTGGCACAAGAGAGTAAAGGAGAGACCATAAAAGGCATGGCGCTTAACGGTCCTCTATTTGCCAAGGTGGATATGGGCTCTGACTACAATGCCACCACCGTCCGAGTCACCGTCGTTCAGGCCTCCATCATCTTCTAG 1641 0.4412 MRCILPTFLALATVLLPVSVVFSALPGSFLPLERAVPLSQRVELQELRARDRARHARILQDVVGGVVDFSVKGISDPSSIGLYYTKVKLGSPPREFNVQIDTGSDILWVNCNTCGDCPQSSQLEIELNFFDTASSSTAALISCSDPICTSSTLSAATECTPQINQCSYTFQYGDGSGTSGYYVSDAMYFDMIIGQSMLVNTSSKIVFGCSTYQSGDLTKTDKAVDGIFGFGPGALSVISQLSSRGITPKVFSHCLKGDGNGGGILVLGEILEPSIVYSPLVPSQPHYNLNLQSISVNGQLLPINSAVFATSNNRGTIVDSGTTLAYLVQEAYDPLVNAITTIVSQYATSIISKGSQCYLVSASVGDIFPPVSLNFAGGASMVLKPEQYLMHNGFVDGVVMWCIGFQKVQEGVTILGDLVLKDKIVVYDLIHQRIGWADYDCSLSVNVSVTTSRDEYVTAGQLSVSSSELGILTKLLPLSFVTLFMHIIVRVNGNLISSCLTVAQESKGETIKGMALNGPLFAKVDMGSDYNATTVRVTVVQASIIF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0910 546 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Bisa03g0910 546 CDD pepsin_A_like_plant 83 441 IPR034161 -
Bisa03g0910 546 PANTHER ASPARTYL PROTEASES 23 435 IPR001461 GO:0004190|GO:0006508
Bisa03g0910 546 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Bisa03g0910 546 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Bisa03g0910 546 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Bisa03g0910 546 FunFam Aspartic proteinase-like protein 2 66 269 - -
Bisa03g0910 546 SUPERFAMILY Acid proteases 80 444 IPR021109 -
Bisa03g0910 546 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Bisa03g0910 546 FunFam Aspartic proteinase-like protein 2 270 448 - -
Bisa03g0910 546 Gene3D Acid Proteases 68 269 IPR021109 -
Bisa03g0910 546 Gene3D Acid Proteases 270 448 IPR021109 -
Bisa03g0910 546 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0910 Bisa-ChrBisa03 12135605 12141659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0910 80 442 Miscellaneous Gene Families AT1G44130 27.749 1.57e-40 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0910 03 12135605 12141659 Bisa07g2283 07 52347576 52352347 CCT
Bisa03g0910 03 12135605 12141659 Bisa03g0910 03 12135605 12141659 ECH