Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0863 ATGGCTCCGCTTCTGTTTATTATTTTAATCTTTATGATCCCTTCAAGCAATGCCTCCTGGCCACCTTCACCTGACTACTGGCCAAGTTCCAAATTCAGGTCTACGAGCTTTCACAGAGGATTTAGAAACCTCTGGGGTCCCCAGCATCAAACACTACACCGAAATGCATTAACAATATGGCTTGACAAAACCTCAGGAAGTGGCTTTAAATCTGTTCGTCCATTTCGATCGGGGTACTTTGGGGCTTCCATTAAGCTCCAACCTGGCTATACTGCAGGAGTTATAACATCTATTTATCTCTCAAACAATGAGGCACATCCGGGGTTCCATGATGAAGTGGACATTGAATTTCTGGGGACTACATTTGGAAAGCCTTATATTTTGCAGACCAATGTGTATATAAGGGGAAGTGGGGATGGTAAAATTATAGGCAGAGAGATGAAATTCCACCTCTGGTTTGATCCTACCAGAGATTTTCATCACTATGCTATACTGTGGAGTCCCAAGGAAATAATATTCTTTGTGGATGACGTGCCCATAAGGAGGTACCCCAGGAAGAGTGCAGCAACATTTCCTCTGAGGCCAATGTGGCTTTATGGTTCAATATGGGACGCTTCATCATGGGCTACTGAAGATGGCAAGTACAAAGCTGATTACAGATACCAGCCTTTTGTGGCAAGGTACACCAACTTCAAGGCTAGTGGTTGCTCAACCAATGCCTCCGCCAGGTGCCGCCCTGTGTCAGCCTCGCCGTATCGCTCCGGTGGCCTCACCGGACAGCAATATAAGGCCATGAAATGGGTTCAGAGAAACTACATGGTTTACAACTATTGCAGAGATCCCAAAAGAGACCACAGACTAACACAAGAGTGCTGGCGTTTAAAGTGA 888 0.4561 MAPLLFIILIFMIPSSNASWPPSPDYWPSSKFRSTSFHRGFRNLWGPQHQTLHRNALTIWLDKTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITSIYLSNNEAHPGFHDEVDIEFLGTTFGKPYILQTNVYIRGSGDGKIIGREMKFHLWFDPTRDFHHYAILWSPKEIIFFVDDVPIRRYPRKSAATFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKASGCSTNASARCRPVSASPYRSGGLTGQQYKAMKWVQRNYMVYNYCRDPKRDHRLTQECWRLK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0863 295 Gene3D - 17 291 - -
Bisa03g0863 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 35 291 IPR044791 GO:0004553
Bisa03g0863 295 PIRSF EndGlu_transf 5 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bisa03g0863 295 FunFam Xyloglucan endotransglucosylase/hydrolase 24 293 - -
Bisa03g0863 295 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 254 291 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Bisa03g0863 295 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 16 228 IPR000757 GO:0004553|GO:0005975
Bisa03g0863 295 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 279 IPR013320 -
Bisa03g0863 295 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0863 Bisa-ChrBisa03 11492961 11494436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0863 4 291 Glycoside Hydrolase AT3G44990 67.128 9.66e-144 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0863 03 11492961 11494436 Bisa07g2240 07 51489498 51491135 CCT
Bisa03g0863 03 11492961 11494436 Bisa03g0863 03 11492961 11494436 ECH