Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0813 ATGATCAACGCACCCAATGGTATGCTATCCACGTCTTCATCCGCCACTGCTCAATCCCCTGGTCTCAAGACTTATTTTAAGACTCCTGAAGGTCGCTACAAGCTTCACTACGAGAAGACACACCCTTCCGCTCTCCTTCACTACGCCCACGGCAAAACCGTCTCTCAGGTAACTCTCGCACATCTCAAGGAGAAGCCAGCACCTTCAACACCGACTGCTCCAACTTCAAGTTTTAGTGCCAGCAGTGGGGTACGGTCAGCAGCTGCTAGATTGTTGGGAGCAGGCAATGGAAGCCGATCACTTAGTTTTGTTGGAGGGAATGGTAGCAGCAAGAATGTTGGAGTAAACAGTAGGATTGGTTCACTTGGTGCCTCTAGTTCAAGTAATATGATAGCTAACTCAAATTTTGATGGGAAAGGGTCTTACTTGATATTCAATGTTGGTGATGCAATTTTTATCAGTGATTTGAATTCTCAAGACAAGGATCCCATAAAGTCTATTCACTTCAGTAATTCAAATCCTGTGTGCCACGCCTTTGATCACGAAGCTAAAGATGGCCATGATTTGCTTATTGGTCTGAGTACTGGTGATGTCTACTCAGTATCACTGAGACAGCAATTACAGGATGTTGGTAAAAAGCTTGTAGGAGCTCAGCATTACAACAAAGATGGTTCTCTCAATAACAGTCGTTGTACTAGTATTGCATGGATTCCTGGAGGTGATGGTGCTTTTGTTGTGGCTCATGCCGATGGGAATTTGTATGTATATGAAAAGAGCAAAGATGGTTCTGGTGATTCGACATTCCCAGTTATTAAAGATCAAACACAATTTTCTGTTGCCCATGCACGTTACAGTAAGAGTAATCCAGTAGCCAGATGGCATATATGCCAGGGTTCAATTAACAGTATATCTTTCTCAAGTGATGGGACATACTTGGCAACTGTTGGAAGAGATGGTTATTTACGAGTCTTTGATTACTCAAAGGAACAACTTATATGTGGTGGGAAAAGTTATTATGGTGCTCTGTTATGTTGTGCTTGGAGCATGGATGGGAAATATATTTTGACTGGAGGAGAAGATGATTTAGTTCAAGTTTGGAGCATGGAGGATCGCAAGGTTGTGGCATGGGGTGAGGGACACAACTCATGGGTCAGTGGAGTGGCTTTTGATTCATATTGGACATCACCAAATTCAAATGACAATACTGAAACTGTTATGTATCGATTTGGCTCTGTGGGCCAGGATACGCAACTGCTTCTATGGGATCTGGAAATGGATGAGATAGTAGTACCGTTACGGCGTGCGCCTGGTGGATCTCCCACTTATAGTGCCGGAAACCAGTCATCCCACTGGGACAGTGTTGTCCCAGTGGGTACACTACAACCTGCTCCAAGCATGCGTGATGTTCCAAAAATATCACCTTTGGTTGCTCATCGTGTGCATACTGAACCTCTCTCAGGGTTAATATTTACCCAGGAATCTGTACTCACTGCCTGTCGGGAGGGACACATAAAAGTCTGGATGAGACCTGGGATTGCTGAGAGCCCACCAAGCAACTCTGATGCATTGTTAGCTACCAGTTTGAAGGAGAAACCTCTACTCTCAAGCAAGGTTAGCAATACTGGATACAAATAA 1635 0.4422 MINAPNGMLSTSSSATAQSPGLKTYFKTPEGRYKLHYEKTHPSALLHYAHGKTVSQVTLAHLKEKPAPSTPTAPTSSFSASSGVRSAAARLLGAGNGSRSLSFVGGNGSSKNVGVNSRIGSLGASSSSNMIANSNFDGKGSYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAFDHEAKDGHDLLIGLSTGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSLNNSRCTSIAWIPGGDGAFVVAHADGNLYVYEKSKDGSGDSTFPVIKDQTQFSVAHARYSKSNPVARWHICQGSINSISFSSDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWTSPNSNDNTETVMYRFGSVGQDTQLLLWDLEMDEIVVPLRRAPGGSPTYSAGNQSSHWDSVVPVGTLQPAPSMRDVPKISPLVAHRVHTEPLSGLIFTQESVLTACREGHIKVWMRPGIAESPPSNSDALLATSLKEKPLLSSKVSNTGYK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0813 544 SMART WD40_4 471 508 IPR001680 GO:0005515
Bisa03g0813 544 SMART WD40_4 328 367 IPR001680 GO:0005515
Bisa03g0813 544 SMART WD40_4 370 422 IPR001680 GO:0005515
Bisa03g0813 544 SMART WD40_4 219 257 IPR001680 GO:0005515
Bisa03g0813 544 SMART WD40_4 286 325 IPR001680 GO:0005515
Bisa03g0813 544 Pfam WD domain, G-beta repeat 342 367 IPR001680 GO:0005515
Bisa03g0813 544 Pfam WD domain, G-beta repeat 297 325 IPR001680 GO:0005515
Bisa03g0813 544 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 376 IPR001680 GO:0005515
Bisa03g0813 544 PANTHER WD REPEAT PROTEIN 12 521 - -
Bisa03g0813 544 ProSiteProfiles Trp-Asp (WD) repeats profile. 300 325 IPR001680 GO:0005515
Bisa03g0813 544 MobiDBLite consensus disorder prediction 1 23 - -
Bisa03g0813 544 SUPERFAMILY WD40 repeat-like 130 507 IPR036322 GO:0005515
Bisa03g0813 544 Gene3D - 11 514 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0813 Bisa-ChrBisa03 10779293 10784993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0813 302 429 Miscellaneous Gene Families AT5G08390 22.656 4.76e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0813 03 10779293 10784993 Bisa03g0813 03 10779293 10784993 ECH