Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0700 ATGAATTCAGCAATGGAGGAAGCGCTGGAACTTGCACGCACCAAGGATACCAAGGAGAGGATGGCCGGTGTGGAGCGGCTTCATCAACTCTTGGAAGCTTCCAGAAAGAGCCTCACTTCGTCCGAGGTCACTTCCCTCGTTGATTGTTGCTTGGATCTCTTGAAGGATAGCAACTTCCGGGTCTCGCAGGGTGCACTTCAAGCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAGCTTCACTTCAATGCGCTTGTTCCCGCCGTCGTCGACCGCTTAGGGGATGCCAAACAGCCAGTTCGTGACGCCGCTAGAAGACTCTTGCTCACTTTCATGGAGGTTTCTTCTCCCACAATAATTGTTGAAAGAGCAGGGTCCTTTGCCTGGACACACAAAAGCTGGAGAGTTAGAGAGGAGTTTTCACGAACTGTTACATCAGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGCTATTCTTCCTCCAATTTTGCAGTTGCTGACTGATCCAAACCCTGGTGTTAGGGAGGCAGCTATTTTGTGCATTGAGGAGATGTACACTCAAGCTGGGCCTCAATTCCGTGATGAACTTCAACGCCACAATCTTCCTTCATCTTTGGTCAAAGATATTAATGCCAGGCTAGAGGGCATTCAACCAAAAGTTCGCTCTTCAGATGGTATTGCAAGTGGTTTTATTACTGGGGATATTAAGCCTTTGAGCGTCAATCCCAAGAAAACTAGTCCAAAGGCTAAAAGCTCATCAAGAGAGACATCTCTTTTTGGAGGAGAAGGTGATCTAACTGAGAAACCCATTGATCCTGTCAAGATATACTCAGAGAAGGAGTTAATCAGGGAAATTGAAAAGATTGTATCTACACTTACACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAGAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCAAGTTTTCGGGGACTCTTGAAGCAACTTGTTGGTCCTTTAAACACACAATTGTCTGATCGAAGATCTAGCATTGTGAAACAGGCTTGCCATCTATTATGCTTTCTGTCGAAGGAACTCTTGGGTGATTTTGATCAATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATCGCAGAGTCTGCAGATAATTGCATAAAAACGATGCTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGACTCCGCAAAAAATGATCGTAGTGCTATACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATACTAGAACATTGGCCTGATGCTCCGGAAATACAGCGATCTGCTGATTTATATGAGGACATGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACCTGGCCAGAGCGTTCCCGCCGCTTATTTTCATCCTTTGACCCAGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGACTACACCGGCGGCATGCTTCACCTTCCATACGCGATAGAGGTGCGCTGCTGTCATTAAGTAGTCAAGCCTCTGCTCCCTCAAATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGAAGTTCAAGTTTACCATCAGGGGCATCTGTCGCCTCTGGTGTAGCAAAGTCACTTGGTAAAGGTACAGAGCGTAGTTTGGAAAGTGTGTTGCATGCTAGCAAACAGAAGGTCAGTGCTATTGAAAGTATGCTTAGAGGTTTGGAATTGTCTGATAAGCATAATTCATCTGCTCTCCGCTCTTCAAGTCTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTTCCTGCTGCTGTCCCAGCATCTAATAACTCTTTAACTACAGAGTCAGCTGCTTCTGGTGTCAATAAAGGTACTAATCAAAATGGTGGTTTGGGTTTGTCTGATATAATCACACAAATTCAAGCTTCCAAAGATTCTGGTAAGTTATCTTACCATAGTAATGTTGCTATGAAGCCTTTATCAGCACTTTCCTCATACTCAAATAAGAAGGCTTCTGAAAGACTACAAGAAAGAGGTTCTGTTGATTATAACATCGACGTCAGGGAGGCTAGGCGGTTTACGAGCCCCCGCATTGATAGGCAGTCTATAGATTTACCTTATAGAGATGGAAACTTTAGGGATTCACAAAGTAGTTATGTGCCTAATTTCCAGAGGCCGTTATTGAGGAAAAATACAGCTGGGTGTATGTCTGCTGGAAGTAGGAGGAGCTTTAATAATAGCCAACTTTCTCTTGGAGAGTCGTCCAGTTATGCTGATGGACCGGCATCTCTTCATGAAGCTCTAAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAAGGTTGCTGCTTTTAATTATCTTCACTCTTTGTTACAGCAAGGTCCAAGGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGCTCTTTTTTCAGCATTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTGGCAGATATTATTCCAGCATGCCGAAAGCCCTTTGAGAGTTACATGGAAAGAATGTTACCTCATGTGTTTTCTCGGTTAGTTGACCCCAAAGAGCTTGTTAGGCAGCCATGCTCAATGACTTTGGAAGTTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCGTTGCTTCGTTCACTAGATGAACAGAGGTCTCCAAAAGCAAAATTGGCCGTTATTGAATTTGCAATCAGCTCCTTTAACAAGCATGCAATGAATCCTGAAGGTGCTGCTAATCCTGGCATCCTGAAATTATGGCTTGCCAAGTTAGCACCATTAGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCCATAACATGCATTATATCAGTGTATTCTCGCTACGATTATGCTGCTGTTCTGAATTTCATTTTCAGTTTGTCAGTTGAAGAGCAAAATGTCTTGAGAAGAGCACTTAAACAGTACACTCCTCGCATTGAAGTAGACCTAATGAACTATCTACAGAGCAAGAAAGATAGACAGCGTACTAAGTCTTCCTATGATCCATCTGATATTGTTGGAACATCCTCAGAAGAGGGGTATGCAGGTGTTTCTAGGAAAGCTCATTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGTAGGAAATGGAGTTCCCAAGATTCAACCCTTATTAAAGCCAGCCTTGGCCAAGCAGCTTCTGGTGAAACTCAGGAACATTTGCATCAGAATCTTGAGGCTGATTCTAATAGCAGTATTCTTGGTTCAAAAACTAAGGACATTGCTTACGCAGTCAATCCAATGAGCCAAAGTTTTGACCCTCAAGCTAGTCAACTTGGGCATGTGAACAGTAGCATTAACTTTGAGGGTCTTTCAACTTCTCGTGTGGATGTTAATGGCCTTATGTCCTTAGAACATTTAAATGTTGCTGGAGGCCTTGGAGATGAAAAAGAACATCCTTCCGAATTGGACCTTAATCATCACTTAGCTGAAGCTGTGAAGATGAACTCCTTGACAGACACAGGACCCAGCATTCCTCAAATTCTTCATTTGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAGAGGACTGCACTTCAACAGTTGGTTGAAGCCTCTATAGCAAACGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTCGTGCTTGAGGTTTTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTTTCATTAATAGTTGAAATGCTCAAAAACCAGAAAGGTGCCATGGAAGATTCAGTTGAAATTGTCATTGAGAAGTTGCTTCATGTTACAAAGGATAATGATCCGAAGGTCTCAAATGCAGCAGAGCACTGCTTGACTATTGTATTATCTCAGTATGATCCATTCAGATGTTTGAGTGTTATTGTCCCTTTACTAGTTACTGAGGACGAGAAAACTCTTGTTACTTGCATAAATTGCTTGACAAAGCTTGTGGGCCGACTCTCCCAGGAGGAACTGATGGCTCAGTTACCTTCATTTCTACCTGCGCTTTTTGAAGCTTTTGGAAACCAAAGTGCAGATGTTCGTAAGACTGTTGTTTTTTGTTTAGTGGATATTTATATCATGCTCGGGAAAGCATTCCGGCCATACTTGCAAGGGCTTAGCGGCACGCAGGTAAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGGGTGCCAATTGATGCCACCCATGATTAG 4332 0.4324 MNSAMEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDCCLDLLKDSNFRVSQGALQALASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTFMEVSSPTIIVERAGSFAWTHKSWRVREEFSRTVTSAIGLFASTELTLQRAILPPILQLLTDPNPGVREAAILCIEEMYTQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRSSDGIASGFITGDIKPLSVNPKKTSPKAKSSSRETSLFGGEGDLTEKPIDPVKIYSEKELIREIEKIVSTLTPEKDWSIRIAAMQRVEGLVLGGAADYPSFRGLLKQLVGPLNTQLSDRRSSIVKQACHLLCFLSKELLGDFDQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADSAKNDRSAILRARCCEYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGLHRRHASPSIRDRGALLSLSSQASAPSNLPGYGTSAIVAMDRSSSLPSGASVASGVAKSLGKGTERSLESVLHASKQKVSAIESMLRGLELSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNNSLTTESAASGVNKGTNQNGGLGLSDIITQIQASKDSGKLSYHSNVAMKPLSALSSYSNKKASERLQERGSVDYNIDVREARRFTSPRIDRQSIDLPYRDGNFRDSQSSYVPNFQRPLLRKNTAGCMSAGSRRSFNNSQLSLGESSSYADGPASLHEALSEGLSSGSDWSAKVAAFNYLHSLLQQGPRGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERMLPHVFSRLVDPKELVRQPCSMTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANPGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSRYDYAAVLNFIFSLSVEEQNVLRRALKQYTPRIEVDLMNYLQSKKDRQRTKSSYDPSDIVGTSSEEGYAGVSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLIKASLGQAASGETQEHLHQNLEADSNSSILGSKTKDIAYAVNPMSQSFDPQASQLGHVNSSINFEGLSTSRVDVNGLMSLEHLNVAGGLGDEKEHPSELDLNHHLAEAVKMNSLTDTGPSIPQILHLICSGGDGSPISSKRTALQQLVEASIANDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLKNQKGAMEDSVEIVIEKLLHVTKDNDPKVSNAAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFRPYLQGLSGTQVKLVTIYANRISQARTGVPIDATHD 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0700 1443 Gene3D - 794 1018 IPR011989 -
Bisa03g0700 1443 SUPERFAMILY ARM repeat 5 406 IPR016024 -
Bisa03g0700 1443 Gene3D - 1226 1433 IPR011989 -
Bisa03g0700 1443 Gene3D - 1 225 IPR011989 -
Bisa03g0700 1443 Gene3D - 271 510 IPR011989 -
Bisa03g0700 1443 MobiDBLite consensus disorder prediction 605 637 - -
Bisa03g0700 1443 Pfam Vacuolar 14 Fab1-binding region 1229 1316 - -
Bisa03g0700 1443 PANTHER CLASP 36 1429 - -
Bisa03g0700 1443 MobiDBLite consensus disorder prediction 250 265 - -
Bisa03g0700 1443 SUPERFAMILY ARM repeat 292 1432 IPR016024 -
Bisa03g0700 1443 Pfam CLASP N terminal 288 504 IPR024395 -
Bisa03g0700 1443 Pfam CLASP N terminal 800 988 IPR024395 -
Bisa03g0700 1443 Pfam HEAT repeat 164 191 IPR000357 GO:0005515
Bisa03g0700 1443 ProSiteProfiles HEAT repeat profile. 164 202 IPR021133 -
Bisa03g0700 1443 ProSiteProfiles HEAT repeat profile. 87 125 IPR021133 -
Bisa03g0700 1443 SMART TOG_3 1199 1435 IPR034085 -
Bisa03g0700 1443 SMART TOG_3 778 1023 IPR034085 -
Bisa03g0700 1443 SMART TOG_3 274 518 IPR034085 -
Bisa03g0700 1443 SMART TOG_3 3 228 IPR034085 -
Bisa03g0700 1443 FunFam Protein peg1 270 517 - -
Bisa03g0700 1443 MobiDBLite consensus disorder prediction 605 619 - -
Bisa03g0700 1443 MobiDBLite consensus disorder prediction 244 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0700 Bisa-ChrBisa03 9312778 9327582 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0700 03 9312778 9327582 Bisa07g2063 07 48901948 48917698 CCT
Bisa03g0700 03 9312778 9327582 Bisa03g0700 03 9312778 9327582 ECH