Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0682 ATGGAAGACACGGTTTATTCTTTTTTCCAACTCTATGTAGTATATACTCTGAAAATGCTACCAGCATATTCCTTTTCTTCCTTGCACCGTTTGTGTTCACAAGTCGTCTGTTCCAGGTTTCGCAAATCCCTATGTTATTTTGATCCAACGGACCACGCGAAAAGAACTGGTCACTTCAATGATCAGGATTATATGACGGGATTTCCTAGGCCTCATGATCAGACCTCACCTTCATCCTCGTCTACCTATAATTCCAATAGCAGTGGTAGAAATGTCTTCATTTTGCTAGCACGGAGAGAGGTTTCGGCTAGATCAAAACATGTGCCAAAACAGCACTGGGGAGAAGCTTCTAAACCAGAAAGTGGCTCTTGCCCTCGTTCTAGAAATGATGCAGCAAGAGATGCAAAACGTGGTCTCCTCTCATGGGTTGAAGCAGAGTCATTGCAGCATTTATCAGCTAAGTATTGCCCTTTGTCGCCTCCCCCACGATCTACTATAGCAGCAGCATTTAGTCCGGATGGAAAAGTGCTTGCATCCACACATGGAGATCACACGGTAAAGATAATTGATTGTGAAACTGGAAGTTGCTTAAAGGTGTTAATTGGTCATAGGAGAACGCCTTGGGTGGTTAGGTTCCATCCATTACATCCACAAATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGCTTATGGGATGCCAACACCTCAGAGTGCATTTTATCTCATCATTTCTATCGAGCCATTGCATCCATTGCTTTCCATGCCAAAGGGGAAATACTTGCTGTAGCATCAGGCCACAAGCTGTACATATGGCACTACAACAAGAGAAGTGAATCATCTTCGCCAATATTTGTGTTGAAGACAAAACGTTCACTTCGGGCTGTGCATTTTCATCCACATACTGCACCATATCTTTTAACTGCTGAGGTCAATGATCTTGACTCTTTGGATTCCTCAATGACGCAGGCAACTTCCCTTGGTTATTTACAATATCCTCCACCTGCTGTGATTGTCGCAAATATTCATTTTAAGGAACATATTAGTTTATACAGTGAACTACCGTATATGTCGTTACCATTATTCTTCTTGTCTTCATATAATGTTGATGATTCAAGAATGGAACCACAAAACGGTGGTCATGTTGCTGGTTCAGATAACATGCAAGTTGAATCTTCTTCCTCAATGCAGTTTCAAGCAGCCACAAATGCTACTAAGCAGAATGATACTACAGTGTCTGTGTCTCCCATGGATACATCCTTTGAGGTTCCTACTAGCTCTCAAACTGGTATAGAATACGCTGCCCATGCTAGTTTCTCTAATGGAATGGGAATTGGTATCAATAACCTCACTGTGGATGGTATGGAGACCGATGAAACAGAACCAACTGAAGGAAGCCGACGTGGAAACTCTACGGATGTCTATTCTTTGAGTAGTGTGCTTCATGGACTTTATAGACAAACAGCAAATTGTGAGGGTTTCTCTGAGTTGGGTCAATTTCAACAGTTTTTTCCTTCAAGAGACCCAAGTGGATGGGAGCTACCCTTTCTGCAAGGATGGTTAATGGGTCAAAGCCATGTTGGTGTTCCCTTGGTGCCTCCTCACATGGGTGGTAGTTATGATGAGCTAGCTCAACAAATTGGTTCTTCCATCATGTCATCAAATTTGTCCGCTCATCATATTGAAGCTACAATGTCATCTTCAGCCATGCCTGGGAACGCAAGTATACCAGGAGCTTCAGGGAGATCTGGTTTATGGAGTCATTTTCCACAATCTCAAGTTCCTGCATCTGAAACTGGCAAACTTGCTGCTTCCATTAATATCCCACATGATGGGACTGATTTCCAAGCCATTATAAGTCGGATCCAGTCAGAACTTGCCACGTCAATGGCTGCCGCAGCTGCTACAGAGTTGCCTTGCACAGTGAAGCTAAGAGTGTGGTCGCATGACATAAAAAATCCCTGTGCACCACTAAATGCTGAAAAATGCCGCCTAATCATACCGCATGCTGTACTGTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGATTTTTAGCTGCTTGCGTGGCATGTATGCTTCCTCAAGTGGAAGCTGATCCAGGATTACAAAATCAAGTACACCAGGATCCTGGAGTTGCAACATCACCAACACGGCATCCAATCTCAGCACAACAAGTTATGTATGAACTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAATTGTGCTTGCATCACGGGCAATTAGAGCAGCTCACTGTCTGACTTCAATCCAGTTCTCTCCTACATCTGAGCACATACTGCTTGCCTATGGTAGACGTCATGGGTCTCTTCTTAAAAGCATTGTCATTGATAGAGAAACAACCCTACCTATATATACAGTGCTAGAGGTATACAGAGTGTCAGATATGAAACTTGTTATGGTGCTTCCTAGTGCGGAGGATGAGGTCAATGTGGCGTGCTTTCATCCTTTTCCTGGGGGAGGGCTTGTTTATGGAACTAAGGAAGGAAAGCTAAGGGTCCTCCACTATGACGGAGCTCACGCTGTAAATGGTGCTGGAGTAAGTTACTTTCCTGAGGAGAACATTATTGGAGCCAATTAA 2610 0.4364 MEDTVYSFFQLYVVYTLKMLPAYSFSSLHRLCSQVVCSRFRKSLCYFDPTDHAKRTGHFNDQDYMTGFPRPHDQTSPSSSSTYNSNSSGRNVFILLARREVSARSKHVPKQHWGEASKPESGSCPRSRNDAARDAKRGLLSWVEAESLQHLSAKYCPLSPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLIGHRRTPWVVRFHPLHPQILASGSLDQEVRLWDANTSECILSHHFYRAIASIAFHAKGEILAVASGHKLYIWHYNKRSESSSPIFVLKTKRSLRAVHFHPHTAPYLLTAEVNDLDSLDSSMTQATSLGYLQYPPPAVIVANIHFKEHISLYSELPYMSLPLFFLSSYNVDDSRMEPQNGGHVAGSDNMQVESSSSMQFQAATNATKQNDTTVSVSPMDTSFEVPTSSQTGIEYAAHASFSNGMGIGINNLTVDGMETDETEPTEGSRRGNSTDVYSLSSVLHGLYRQTANCEGFSELGQFQQFFPSRDPSGWELPFLQGWLMGQSHVGVPLVPPHMGGSYDELAQQIGSSIMSSNLSAHHIEATMSSSAMPGNASIPGASGRSGLWSHFPQSQVPASETGKLAASINIPHDGTDFQAIISRIQSELATSMAAAAATELPCTVKLRVWSHDIKNPCAPLNAEKCRLIIPHAVLCSEMGAHFSPCGRFLAACVACMLPQVEADPGLQNQVHQDPGVATSPTRHPISAQQVMYELRIYSLEEATFGIVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDRETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPFPGGGLVYGTKEGKLRVLHYDGAHAVNGAGVSYFPEENIIGAN 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0682 869 ProSitePatterns Trp-Asp (WD) repeats signature. 220 234 IPR019775 -
Bisa03g0682 869 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 84 865 - -
Bisa03g0682 869 Pfam WD domain, G-beta repeat 167 190 IPR001680 GO:0005515
Bisa03g0682 869 Pfam WD domain, G-beta repeat 194 233 IPR001680 GO:0005515
Bisa03g0682 869 MobiDBLite consensus disorder prediction 62 86 - -
Bisa03g0682 869 SUPERFAMILY WD40 repeat-like 166 309 IPR036322 GO:0005515
Bisa03g0682 869 FunFam Activating molecule in BECN1-regulated autophagy protein 147 327 - -
Bisa03g0682 869 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 238 - -
Bisa03g0682 869 Gene3D - 147 322 IPR015943 GO:0005515
Bisa03g0682 869 SMART WD40_4 193 233 IPR001680 GO:0005515
Bisa03g0682 869 SMART WD40_4 151 190 IPR001680 GO:0005515
Bisa03g0682 869 SMART WD40_4 236 273 IPR001680 GO:0005515
Bisa03g0682 869 SMART WD40_4 805 845 IPR001680 GO:0005515
Bisa03g0682 869 SUPERFAMILY WD40 repeat-like 679 846 IPR036322 GO:0005515
Bisa03g0682 869 MobiDBLite consensus disorder prediction 105 130 - -
Bisa03g0682 869 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 242 IPR001680 GO:0005515
Bisa03g0682 869 MobiDBLite consensus disorder prediction 69 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0682 Bisa-ChrBisa03 8930155 8940881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0682 167 403 Miscellaneous Gene Families AT5G08390 24.176 1.11e-08 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0682 03 8930155 8940881 Bisa03g0682 03 8930155 8940881 ECH