Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0677 ATGGAGGACGATGCTGATATATACGATGGTATTAGAGCTCAATTCCCTCTTACATTTGGAAAGCAACCCAAGTCTCAGACCTCTTTTGAATCCATCCACAATGCCACTCGTCGTTCCGCTTGCAATCCCACCTCTAAACCCTCTTCAGAGCCCTCTGCTACAACCACCGGCGCCAAAAGTACCGTCGACCTCCCTTCTCTGTCTTCGTCTTCCAAGGCCTGGCTTGGTTCCCTCCGCAACTCCAGAAACCCTAACCCTGATTCTACCGCCGATCGTCGTGGTGGTTCTTCCACAATTGGGCCGCCTAGCCCGCCGCCGACGGTGGACTCTGATGAGGATGACGGTGTTATGGTGGGACCGCCTCGGCCTCCTGAGGAGGACGAGGATGGGGGTGCGATTATTGGGCCTCCTCGACCGCCTGTTGGTTTGGGTTTGGGTGAAGAAGGGGATGAGGATGGCGACATGATTGGCCCGCCAAGGCCACCCCCTGGTTCGAATTTCGGCGCTTCGAGTTCTGAGGATGATTCAGACGAAGACGAGCTTGGGAATCGGTTTCGTATTCCGCTTAGCAACGAGATAGTTCTCAAAGGCCACACTAAGGTTGTGTCAGCTCTTGCGGTTGATCACTCTGGGTCTAGAGTACTTTCTGGAAGTTATGACTACACAGTTCGTATGTATGACTTTCAAGGAATGAATGCACGTTTGGAATCATTTCGACAACTGGAGCCATTTGAAGGTCATCAAATTCGCAATCTAAGCTGGAGTCCTACTGCAGATTGCTTTTTATGTGTGACAGGATCAGCTCAAGCAAAGATCTATGACCGTGATGGGCTCACCTTGGGAGAGTTTGTGAAGGGGGATATGTATATTCGTGACCTAAAAAATACTAAAGGCCACATATCTGGATTGACATGTGGAGAGTGGCACCCAAAAACTAAGGAAACTATTTTAACATCATCAGAGGATGGATCACTGCGTATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTTATCAAACCAAAGCTTGCGAGACCTACAAGAGTTCCTGTCACTACATGTGCATGGGATCGTGAAGGTAAATGCATCGCTGGTGGTATAGGAGATGGTTCTATACAGATTTGGAGTATTAAACCTGGGTGGGGAAGCAGGCCAGATGTACACATTGAAAAAGGGCATTCTGATGATATTACCAGTCTAAAGTTTTCTAGCGATGGGACAATTTTACTGTCAAGAAGCTTCGATGATTCATTGAAGGTTTGGGATTTGCGCAAAATGAAGGAACCTCTAAAGGTGTTCGAAGATCTCCCAAATCACTATGGGCAAACAAATATTGCTTTTAGTCCTGATGAGCAACTCTTTTTGACTGGAACATCTGTTGAAAGGGAGAGATCTAGTGGAGGTTTATTGTGCTTCTTTGATCGTGTAAAGCTCGAGCTTGTTTCAAAGGTTGGCATCTCCCCCACTTGTAGTGTTGTGCAGTGTGCTTGGCATCCTAAACTGAATCAGGTTTTTGCAACTGTTGGTGATAAAAGCCAAGGAGGAACTCACATACTCTATGATCCAACCCTCAGTAAGAGAGGAGCTCTAGTTTGTGTTGCACGGGCACCAAGGAAAAAATCCATTGATGATTTTCAGGCAAAACCTGTTGTTCACAATCCTCATGCCTTGCCACTATTTAGAGATCAGCCAAGCAGAAAGCGTCAGCGAGAGAAAATACTGAAGGATCCACTGAAGTCCCATAAGCCAGAAGTTCCTATTACAGGACCTGGCTTTGGTGGACGAGTTGGTACCAGTCAAGGAAGCTTGCTGACTCAATATCTTCTGAAGCAAGGGGGTATGATTAAGGAGACGTGGATGGAGGAAGATCCAAGAGAAGCTATCCTGAAATATGCTGACATTGCAGCGAAGGATCCAAAGTTCATTGCTCCAGCATATGCACAAACCCAACCTGAGCCAGTTTTTCAGAAGTCAGATTCTGATGAGGAAGAGAAATGA 2001 0.4673 MEDDADIYDGIRAQFPLTFGKQPKSQTSFESIHNATRRSACNPTSKPSSEPSATTTGAKSTVDLPSLSSSSKAWLGSLRNSRNPNPDSTADRRGGSSTIGPPSPPPTVDSDEDDGVMVGPPRPPEEDEDGGAIIGPPRPPVGLGLGEEGDEDGDMIGPPRPPPGSNFGASSSEDDSDEDELGNRFRIPLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNARLESFRQLEPFEGHQIRNLSWSPTADCFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPTRVPVTTCAWDREGKCIAGGIGDGSIQIWSIKPGWGSRPDVHIEKGHSDDITSLKFSSDGTILLSRSFDDSLKVWDLRKMKEPLKVFEDLPNHYGQTNIAFSPDEQLFLTGTSVERERSSGGLLCFFDRVKLELVSKVGISPTCSVVQCAWHPKLNQVFATVGDKSQGGTHILYDPTLSKRGALVCVARAPRKKSIDDFQAKPVVHNPHALPLFRDQPSRKRQREKILKDPLKSHKPEVPITGPGFGGRVGTSQGSLLTQYLLKQGGMIKETWMEEDPREAILKYADIAAKDPKFIAPAYAQTQPEPVFQKSDSDEEEK 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0677 666 MobiDBLite consensus disorder prediction 115 132 - -
Bisa03g0677 666 SUPERFAMILY WD40 repeat-like 182 511 IPR036322 GO:0005515
Bisa03g0677 666 ProSiteProfiles Trp-Asp (WD) repeats profile. 296 338 IPR001680 GO:0005515
Bisa03g0677 666 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 236 IPR001680 GO:0005515
Bisa03g0677 666 MobiDBLite consensus disorder prediction 646 666 - -
Bisa03g0677 666 MobiDBLite consensus disorder prediction 565 595 - -
Bisa03g0677 666 Pfam WD domain, G-beta repeat 294 329 IPR001680 GO:0005515
Bisa03g0677 666 Pfam WD domain, G-beta repeat 389 423 IPR001680 GO:0005515
Bisa03g0677 666 Pfam WD domain, G-beta repeat 351 377 IPR001680 GO:0005515
Bisa03g0677 666 Pfam WD domain, G-beta repeat 193 227 IPR001680 GO:0005515
Bisa03g0677 666 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 127 665 - -
Bisa03g0677 666 PRINTS G protein beta WD-40 repeat signature 364 378 IPR020472 -
Bisa03g0677 666 PRINTS G protein beta WD-40 repeat signature 316 330 IPR020472 -
Bisa03g0677 666 PRINTS G protein beta WD-40 repeat signature 410 424 IPR020472 -
Bisa03g0677 666 ProSitePatterns Trp-Asp (WD) repeats signature. 316 330 IPR019775 -
Bisa03g0677 666 MobiDBLite consensus disorder prediction 565 583 - -
Bisa03g0677 666 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 229 - -
Bisa03g0677 666 CDD WD40 194 513 - -
Bisa03g0677 666 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 296 331 - -
Bisa03g0677 666 Gene3D - 285 524 IPR015943 GO:0005515
Bisa03g0677 666 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 432 IPR001680 GO:0005515
Bisa03g0677 666 MobiDBLite consensus disorder prediction 18 181 - -
Bisa03g0677 666 Gene3D - 163 284 IPR015943 GO:0005515
Bisa03g0677 666 FunFam Nucleotide binding protein 137 283 - -
Bisa03g0677 666 SMART WD40_4 337 377 IPR001680 GO:0005515
Bisa03g0677 666 SMART WD40_4 286 329 IPR001680 GO:0005515
Bisa03g0677 666 SMART WD40_4 384 423 IPR001680 GO:0005515
Bisa03g0677 666 SMART WD40_4 188 227 IPR001680 GO:0005515
Bisa03g0677 666 SMART WD40_4 237 274 IPR001680 GO:0005515
Bisa03g0677 666 MobiDBLite consensus disorder prediction 19 96 - -
Bisa03g0677 666 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 391 425 - -
Bisa03g0677 666 FunFam WD repeat-containing protein 70 284 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0677 Bisa-ChrBisa03 8850338 8854041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0677 298 490 Miscellaneous Gene Families AT5G08390 24.227 6.64e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0677 03 8850338 8854041 Bisa03g0677 03 8850338 8854041 ECH