Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0538 ATGGCGGGAAAAGGAGGGAAGGGGCTTCTGGCTGCAAAAACCACAGCCGCTAACAAGGACAAAGATAAGGACAAGGATAAGAAACGGCCCGTCTCCCGGTCATCTCGTGCCGGAATCCAGTTTCCTGTGGGTCGTATTCATAGACAGCTGAAACAAAGGATCCAAGCGAATGGGCGTGTTGGGGCCACTGCTGCTGTTTACTTGGCTTCCATACTTGAATACCTGACAGCTGAAGTTCTTGAGCTTGCTGGAAATGCAAGCAAAGATCTGAAGGTGAAGAGGATCACGCCAAGGCATTTGCAGCTTGCTATCAGAGGAGACGAGGAGCTTGACACCCTTATTAAAGGCACCATTGCTGGTGGGGGTGTCATCCCACACATTCATAAGTCCTTGATCAACAAAACCTCCAAGGAATGA 417 0.4988 MAGKGGKGLLAAKTTAANKDKDKDKDKKRPVSRSSRAGIQFPVGRIHRQLKQRIQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0538 138 MobiDBLite consensus disorder prediction 16 33 - -
Bisa03g0538 138 FunFam Histone H2A 17 138 - -
Bisa03g0538 138 SUPERFAMILY Histone-fold 18 115 IPR009072 GO:0046982
Bisa03g0538 138 Gene3D Histone, subunit A 17 138 IPR009072 GO:0046982
Bisa03g0538 138 SMART h2a4 18 138 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 MobiDBLite consensus disorder prediction 1 38 - -
Bisa03g0538 138 PRINTS Histone H2A signature 59 74 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 PRINTS Histone H2A signature 74 87 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 PRINTS Histone H2A signature 88 102 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 PRINTS Histone H2A signature 115 133 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 PRINTS Histone H2A signature 29 51 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 Pfam Core histone H2A/H2B/H3/H4 12 106 IPR007125 GO:0003677
Bisa03g0538 138 CDD H2A 29 134 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 PANTHER HISTONE H2A 23 134 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bisa03g0538 138 Pfam C-terminus of histone H2A 108 137 IPR032454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0538 Bisa-ChrBisa03 6874166 6875178 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0538 03 6874166 6875178 Bisa07g1910 07 46285882 46287154 CCT