Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0511 ATGGGTTGGAAAGCAGCCGAGAGACTCATCAGGCACTGGAAGATTCTCAGAGGGGACAATGTAATGATTATAAGGGGCAATGATAGGGGCGAGACAGGGATTATTAATCGTGTAATTCGCTCTCAGAATCGTGTAATTGTTGAGGGAAAAAATCTGAATCCATTCAGCCCCCGAGGGCTATATTTCTCAAGTATGGTTGAAACAATCCTGGTTCAGGCTCGAGACCCAGCTAAACTAAATATGGAAATACAAAATGCTATCGATGGGAATCAATTAGATGATACATGGAAGTTATTTGAGCAGCATATGCAATTAGAGGGGTTTCCTAGAAAATCTGTTGTCAACAAGCTTCTAGCAAGTTTTGTGGAAAGCCTTGATGTTCAGTGGCTGGAGAAAGCTTATGGATTGGTCGAACAGGCTATTGAGGAAAGCAAACAGAACTTGTTAGAGAAGGAAGTACTTATATATCTCTGCTTCGGTCTTGCCAAAGCTGGACTAGCAGTATCTGCATCAACTGTTTTAAGAAAGATGATAGATATGGAGCAATTTCCCCCCGTTACTGCTTGGTCTGCAGCTTTGGCTCACATGTCACAAACAGCAGATGGAGCTTACCTTGCTGCTGAGTTGATTCTTGAGATAAGTTATTTGTTCCAAAATAACAGAGTGGATCCACGTAAAAAGAGAAATTCACCTTTGATAGCTATGAAGCCTGATACTAGTGCTTTTAACATTGCTTTGGCAGGGTGTCTCTTATTTGAGAAAACTAGGAAAGCAGAGCTGCTTCTTGATATGATGCCTCGAATTGGTGTCAAGGCTGATGCAAACTTACTGATAATAATGGCTCATGTGTATGAGAGGAATGGACGAAGAGAAGAGCTAAAGAAGCTGCAAAGGCACATAGAGGAAGCACCCAATCTTACTGATTTTCAGTTCCGCCAATTTTATAACTGTTTGCTTTCATGCCATTTGAAATTTGGGGATCTAGATTCTACATCAAACATGGTTTTGAAAATGCTTAGGAAAGCGAAGGAGGCAAAAAATTCTCTGGCAGCAGCTAAATTTATGATTGACACGACTGAAATTGGCCATAAATATTCTTCTAGACTGGCTTCTATACAAAATTTGAGTGTTAGTAAAGATTCTGATAGTTTAAAGCATAACAAACCAGAAAGGGATACTATCATATCTTATGAGGAATTCTCTAGAGATCGAAATTTCTTAAAACTTGAAGAAGAGTCAAAGGCTGTTCTTGGTTCTTTGTTAGCCAAGTTACAGATGCAGGTTAACTTGATTACAAGTGAGCATGGTATACTCCAACCAACTGAATCAATTTATGTGAAACTGGTTAAAGCTTTTCTAGAAGCTGGTAAGACCAAGGATTTGGCAGAGTTTCTAATCAAGGCAGAAAGAGAAGATTCCCCACTTTCCAGTGACAGTTCAGTCTTGGTTCATGTCATTAATTCATGTATTTTACTTGGATGGTTGGATGAAGCCCATGACCTTCTCGATGAGATGCGGTTAGCTGGAGTTAAAACTGGTTCATCTGTATATGCTTCTCTCTTGAAAGCATACTGTCAAGCAAATAGAGCTGCGGATGCCACTTCACTTTTGAGAGATGCAAGAAAGGCTGGTATCCAACTGGACTCAAGGTCTTATGATGCAATTATCCAATCCAGGGTGCATCAGGATGATACAGAGGGAGCACTCCGTTTGTTCAAAGAGATGAAAGAGGCCAAAATTCCAAAAATTGGTCAACAAGACTCTGTCATGCTGGCTAAAAGTTACTCAGAGAAAAATGTATCTGGCTTGATAACAAAGCTATTGCAGGAAATCAAGGAAGGACAAAAAGTGGATTATGGAGTTCATGACTGGAATAATGTAATCCATTTTTTCTGTAAGAAGAAGCTAATGAAAGATGCTGAAAAGGCTCTGAAGAAGATGAGGAGCCTAGGCCACACCCCAAATGCACAAACTTTTCATTCTATGGTCACTGGGTATGCTGCTATTGGAGGGAACTATCTGGAGGTAACAGAGCTTTGGGGTGAGATGAAAGCTCTTGCTTCTTCGGTCTCAATGAAGTTTGATCAGGAACTTTTGGATTCAGTGCTGTATACATTTGTGAGGGGTGGATTCTTCAATCGAGCCAATGAAGTTGTAGAGATGATGGAAAAAGCTAACATGTTTATTGACAAGTACAAGTACCGAATGCTCTTCTTGAAGTACCATAAAACACTTTATAAAGGCAAGGCTCCCAAATTTCAGACAGTAGCCCAATTAAACAAGAGGGAAGCAGCCCTGGCTTTTAAAAGATGGTATCCTACACAGCTAGCTGATCTTTTGGAATTGGTTGATATAGTTTGGAAGAAATGGGAGTTATATAAATTCTCTAGAGGGATCATCAAGTGGATTGACCATTTGTCTGTAGTTGTTGGTGGGAAGGACAGATCATTTCTGTATCTTGATAAGTGTCAAAAAACATATATTAGGCAAGGACAAGGTCATGAAGGGGGGATCTTTTCAGTTGAAGCCCCAATTCATACCTCAAACGTTCAGGATAATATAACAATAACTTTGACTTGTGTTACTAATGCAGGAAGCCTAGCAAGGTCGGAATCAGATATCTTGAAGATGGAACTAAAGTCAGAGTATCCCAAGGTATTGGAGCATCTGGGTCCATAA 2679 0.4001 MGWKAAERLIRHWKILRGDNVMIIRGNDRGETGIINRVIRSQNRVIVEGKNLNPFSPRGLYFSSMVETILVQARDPAKLNMEIQNAIDGNQLDDTWKLFEQHMQLEGFPRKSVVNKLLASFVESLDVQWLEKAYGLVEQAIEESKQNLLEKEVLIYLCFGLAKAGLAVSASTVLRKMIDMEQFPPVTAWSAALAHMSQTADGAYLAAELILEISYLFQNNRVDPRKKRNSPLIAMKPDTSAFNIALAGCLLFEKTRKAELLLDMMPRIGVKADANLLIIMAHVYERNGRREELKKLQRHIEEAPNLTDFQFRQFYNCLLSCHLKFGDLDSTSNMVLKMLRKAKEAKNSLAAAKFMIDTTEIGHKYSSRLASIQNLSVSKDSDSLKHNKPERDTIISYEEFSRDRNFLKLEEESKAVLGSLLAKLQMQVNLITSEHGILQPTESIYVKLVKAFLEAGKTKDLAEFLIKAEREDSPLSSDSSVLVHVINSCILLGWLDEAHDLLDEMRLAGVKTGSSVYASLLKAYCQANRAADATSLLRDARKAGIQLDSRSYDAIIQSRVHQDDTEGALRLFKEMKEAKIPKIGQQDSVMLAKSYSEKNVSGLITKLLQEIKEGQKVDYGVHDWNNVIHFFCKKKLMKDAEKALKKMRSLGHTPNAQTFHSMVTGYAAIGGNYLEVTELWGEMKALASSVSMKFDQELLDSVLYTFVRGGFFNRANEVVEMMEKANMFIDKYKYRMLFLKYHKTLYKGKAPKFQTVAQLNKREAALAFKRWYPTQLADLLELVDIVWKKWELYKFSRGIIKWIDHLSVVVGGKDRSFLYLDKCQKTYIRQGQGHEGGIFSVEAPIHTSNVQDNITITLTCVTNAGSLARSESDILKMELKSEYPKVLEHLGP 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0511 892 Pfam PPR repeat 485 510 IPR002885 -
Bisa03g0511 892 SUPERFAMILY Translation proteins SH3-like domain 10 54 IPR008991 -
Bisa03g0511 892 CDD KOW_RPL26 18 52 IPR041988 GO:0003723
Bisa03g0511 892 Gene3D Tetratricopeptide repeat domain 478 583 IPR011990 GO:0005515
Bisa03g0511 892 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 548 582 IPR002885 -
Bisa03g0511 892 PANTHER BNAC05G43320D PROTEIN 62 772 - -
Bisa03g0511 892 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 513 547 IPR002885 -
Bisa03g0511 892 Pfam PPR repeat family 622 667 IPR002885 -
Bisa03g0511 892 Gene3D - 10 56 IPR014722 -
Bisa03g0511 892 Pfam KOW motif 17 48 IPR005824 -
Bisa03g0511 892 NCBIfam pentatricopeptide repeat 516 548 IPR002885 -
Bisa03g0511 892 NCBIfam pentatricopeptide repeat 551 580 IPR002885 -
Bisa03g0511 892 NCBIfam pentatricopeptide repeat 624 656 IPR002885 -
Bisa03g0511 892 Gene3D Tetratricopeptide repeat domain 588 769 IPR011990 GO:0005515
Bisa03g0511 892 Gene3D Tetratricopeptide repeat domain 160 379 IPR011990 GO:0005515
Bisa03g0511 892 Pfam Pentatricopeptide repeat domain 535 580 IPR002885 -
Bisa03g0511 892 SMART kow_9 14 41 IPR005824 -
Bisa03g0511 892 CDD KOW_RPL26 823 851 IPR041988 GO:0003723
Bisa03g0511 892 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 620 654 IPR002885 -
Bisa03g0511 892 ProSitePatterns Ribosomal protein L24 signature. 18 35 IPR005825 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0511 Bisa-ChrBisa03 6408897 6413145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0511 516 737 Miscellaneous Gene Families AT4G11690 22.467 1.16e-08 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0511 03 6408897 6413145 Bisa03g0511 03 6408897 6413145 ECH