Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0507 ATGTTTCGCTGCAGTTTATGCTTGCAAAGAATAGGTATGTGGATGCAACAAGTCTGTGGTTCTAACCCACCCCATCAGGCCTGTGAAGTAGTTTTCCACTCATCCACCAGATGGAAAAAGAAACTCAGCATGCCTGAGGCTGTCTTTTGGCATGATACAGGAATTAGGTCTGGCAGCTCAGTGCTTTTTCTAATATACCACGAATTCAGTGCTACTGAATTAACGGACGCGAATGAAATAGTGAATATTATGTCTGGATTGATTGAAGGACTTCCTGACGCTATTGCAATCAGGTGCCTTGCACGGGTTCCCTTTTACCTCCACCCAAAATTAGAGCTTGTCTCTCGCTCTTGGCGTGCAGCCATTCATAGCCCTGAACTATTTAAAGCTCGACAGGAGGTTGGTTCATCTGAGGATGTGTTATGTGTCTGTGCTTTTGATCCAGAGAACCTTTGGCAGCTGTATGACCCTCTACGAGATCTCTGGATTACACTTCCTGTTCTTCCCTCAAAAATCAGACACCTTTCTCACTTTGGCGTGGTCTCGACTGCTGGAAAGTTATTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCATTGACTGGTGACCAAGATGGTAGTTTTGCAACAAACGAAGTCTGGTCATATGACCCTGTAGTCCGGCAGTGGGCCTCACGTGCATCAATGCTTGTGCCCCGTGCTATGTTTGCATGCTGCGTTTTGAATGGAAAGATAGTTGTCGCAGGGGGCTTCACTAGCTGCAGAAAATCAATTTCTCAAGCAGAAATGTATGACCCTGAAAAGGATGTGTGGATTCAAATGCCCGATCTGCACTGCACCCATAATTCAGCTTGTTCAGGAGTAGTTATTGGAGGGAAGGTCCATGTATTGCACAAGGGGTTGTCAACAGTGCAAGTTTTAGACAATGCAGGGCCTCCTGGATGGAATGTTGAGGAATGTGGGTGGCTCCAAGGTCCGATGGCAGTTGTTGGAGGTGCTCTATATGTGATGAGCCATGGATTTATTATCAAGCAGGACAAAGAAGTGAGAAAGGTGGTAGGTTCAGCATCTGAGTTTCGAAGGAGAATTGGGTTTGCAATGGTTGGGGTAGGTGATGATTTATATGTGATCGGAGGCGTCATTGGCCCTGACAGGTGGAACTGGGATATTAAACCATTGGCTGATGTAGATATTCTCACGCTTGGGAATGAGAGACCAACCTGGCGCCAGGGAGCTCCGATGTCTCGGTGTCGCGGTACTATCCTTGGTTGTACGCTGCTGAAAATTTAG 1290 0.4667 MFRCSLCLQRIGMWMQQVCGSNPPHQACEVVFHSSTRWKKKLSMPEAVFWHDTGIRSGSSVLFLIYHEFSATELTDANEIVNIMSGLIEGLPDAIAIRCLARVPFYLHPKLELVSRSWRAAIHSPELFKARQEVGSSEDVLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGVVSTAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWASRASMLVPRAMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIQMPDLHCTHNSACSGVVIGGKVHVLHKGLSTVQVLDNAGPPGWNVEECGWLQGPMAVVGGALYVMSHGFIIKQDKEVRKVVGSASEFRRRIGFAMVGVGDDLYVIGGVIGPDRWNWDIKPLADVDILTLGNERPTWRQGAPMSRCRGTILGCTLLKI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0507 429 SMART fbox_2 91 131 IPR001810 GO:0005515
Bisa03g0507 429 CDD F-box_AtAFR-like 87 131 - -
Bisa03g0507 429 SUPERFAMILY Kelch motif 142 418 IPR015915 GO:0005515
Bisa03g0507 429 PANTHER OS02G0202900 PROTEIN 80 349 IPR045887 -
Bisa03g0507 429 Gene3D - 143 427 IPR015915 GO:0005515
Bisa03g0507 429 SMART kelc_smart 186 243 IPR006652 GO:0005515
Bisa03g0507 429 SMART kelc_smart 373 428 IPR006652 GO:0005515
Bisa03g0507 429 SMART kelc_smart 244 291 IPR006652 GO:0005515
Bisa03g0507 429 Pfam Kelch motif 232 277 IPR006652 GO:0005515
Bisa03g0507 429 Pfam Kelch motif 361 415 IPR006652 GO:0005515
Bisa03g0507 429 Pfam Kelch motif 175 229 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0507 Bisa-ChrBisa03 6390454 6393308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0507 91 275 Miscellaneous Gene Families AT4G33900 30.102 1.70e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0507 03 6390454 6393308 Bisa03g0507 03 6390454 6393308 ECH