Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0506 ATGGAAGAGGGGGAAGCGAGCAAAGATGTTGAAGTGGCTCCGGCACTGATTGCGGTGCACCCTCACCAAAAGTCTGTTGCCGTTGCCGTTGGACCGCATCTGCGGGTATTCGACCTTAGTGCTGATTGTTCAGCTCTTTTGATTGATGACTCCGGGGGGCCATTTCACAAAGATTCTATCAGAGCTATTCGGTTTGGCGCAAAAGGGAAGTTCTTTGTATCCGCGGGTGATGATAAAATTGTCAAGATATGGTCAGCTGAATCTTGGCGGTGCATCTGTAATGTGTCCTCAGAAAAGAGAGTTAGTGCAGTTGCTATAAGCAATGATGGTTCTCATGTGTGTTTCGCCGACAAATTCGGTATTGTCTGGGTTGTGGATCTGACTGGATGTGATGGCAATAAGCCGTTACTTGATAAGAAGGCAACACCACTTCTTTCTCACTATTGTAGTATCATCACTGATTTGGAATTTTCACCTGATGGTCGGTTCATTGCTAGTGCTGATCGGGATTTTAAAATCCGTGTTACTGTTTTTCCCAACAAGCCCTTAGATGGAGCTCACGAGATACAAAGTTTCTGTCTTGGTCATACAGAGTTTGTTTCCTGCCTTGCCTTTGTTCATGATCAGAAATACCCCCAAGGCCTTCTCATCTCTGGAAGTGGTGATTCAACAGTCCGTTTGTGGGATACCTCTTGTGGAGCACTCCTTGATAGCTGTGAGGTTGTAATTAAGGCGGGAGTTTTAGAGTCCCATGATGAAGCAGAGGAGCATGACTACGCTGTGACTGATTTATGCACCATCATGGATGGGTTGCTTGTTGCAGTGGCTCTTCAGAGCTTTCAAGGAATAGTATTGCTGAGGTGCAACCTTTCGGCACCAACGCTCTCTGTTGCCAAGGTCGTTTTTCTTGCAGGAGAGGCCTTTGTCCCTACTAGCCTAGGGAGCAGCTCCTCTGCTGGGTTATTGTGGATGGTGATGGGTGTTTCTAGTTTACCCGGTTCTAGTTATCCAGCTTTGGCTCGCCTCCGAGTAATTTCTGGTTTTGATGTTGAACAAGAGCCAGCTGTTGTGGAAGATGATAAGATACCTGGGGGCGAGAAACTGCTAGAAACATTGCAGGGAAGCACATCTGTTGATGAAAAAGCTTTCTTGGCAGCTGCTGAAGCTGTCAAAACAGCAATGTGCAATCTGTTAATTAAAAAGCATTACCCTTTTGAGAATAGAGAATACAAGAAGAGAACCAGAAATGATAGAAAACTTAAGGAGTAA 1269 0.4555 MEEGEASKDVEVAPALIAVHPHQKSVAVAVGPHLRVFDLSADCSALLIDDSGGPFHKDSIRAIRFGAKGKFFVSAGDDKIVKIWSAESWRCICNVSSEKRVSAVAISNDGSHVCFADKFGIVWVVDLTGCDGNKPLLDKKATPLLSHYCSIITDLEFSPDGRFIASADRDFKIRVTVFPNKPLDGAHEIQSFCLGHTEFVSCLAFVHDQKYPQGLLISGSGDSTVRLWDTSCGALLDSCEVVIKAGVLESHDEAEEHDYAVTDLCTIMDGLLVAVALQSFQGIVLLRCNLSAPTLSVAKVVFLAGEAFVPTSLGSSSSAGLLWMVMGVSSLPGSSYPALARLRVISGFDVEQEPAVVEDDKIPGGEKLLETLQGSTSVDEKAFLAAAEAVKTAMCNLLIKKHYPFENREYKKRTRNDRKLKE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0506 422 Gene3D - 51 323 IPR015943 GO:0005515
Bisa03g0506 422 FunFam tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit 99 356 - -
Bisa03g0506 422 Hamap tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit <gene_name> [WDR4]. 23 414 IPR028884 GO:0036265
Bisa03g0506 422 SMART WD40_4 185 229 IPR001680 GO:0005515
Bisa03g0506 422 SMART WD40_4 88 126 IPR001680 GO:0005515
Bisa03g0506 422 SMART WD40_4 138 177 IPR001680 GO:0005515
Bisa03g0506 422 SMART WD40_4 40 85 IPR001680 GO:0005515
Bisa03g0506 422 Pfam WD domain, G-beta repeat 146 175 IPR001680 GO:0005515
Bisa03g0506 422 Pfam WD domain, G-beta repeat 56 85 IPR001680 GO:0005515
Bisa03g0506 422 Pfam WD domain, G-beta repeat 193 229 IPR001680 GO:0005515
Bisa03g0506 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 56 88 IPR001680 GO:0005515
Bisa03g0506 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 193 229 - -
Bisa03g0506 422 PANTHER WD40 REPEAT PROTEIN 4 13 414 IPR028884 GO:0036265
Bisa03g0506 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 193 238 IPR001680 GO:0005515
Bisa03g0506 422 SUPERFAMILY WD40 repeat-like 17 276 IPR036322 GO:0005515
Bisa03g0506 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 53 88 - -
Bisa03g0506 422 FunFam tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit 13 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0506 Bisa-ChrBisa03 6384566 6387957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0506 56 236 Miscellaneous Gene Families AT5G08390 24.725 6.51e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0506 03 6384566 6387957 Bisa03g0506 03 6384566 6387957 ECH