Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0417 ATGAAGCGGGTGTGGAAACTCTCCGACGCTGCCCAAGCAGAGTTGTTCTGCTTCCATAGAACCTCTGCAAAACTAAAACCCCTTAATCCCCTCCCTGTTTTCCTCGAAAGCTTCGCTAATTATAGATGCACTCACCAAGTCAGCACCCAAGCTCATCCCTCCGGACCTTCTGGGCTCCGAGATATGGCTGCCTTGTTCTCACGCACTCCCTGTTACTTAAGTTTATTAGACAGACAGGTTTTAACCAGAAAACTTGAGATCTTGGGGGACGAATTGGTTCGGGCAGCCCAGGACTCTGATAGAGTTCTCAAGATTTTGGACGATAATTTTGATTCTTTGTGTCGGTGTTATCCTGATGGGTCCGCGTTTGTTGAGCTTTTAGATCTGTTGGATTCATGGCCTGCCTTGGCTCTTACGGTTTTAAATTGGAGAAGAAAAAGCTCTTCTGGTGGCATCCCCATGGCACCCGAAGAGTACTCTAAGGGTATCAAACTTGCTGGTAGGTCTAGAAATATTGATCTTGCAGTTGAACTCTTTAACGAAGCTGCAAACAATCTAATGAAAACAACAGCTACTTATAATGCACTGATGGGTGTTTATATGTTCAATGGTCTTGCTGACAAATGCCAGTCATTATTTCGGCAGATGAAGATTGATGCAAGTTGTAGCCCTAACATTGTAACATACAATATTATTATTTCTGTTTTTGGTCGCTTGATGCTAACAAATCATGTGGAAGCAACATTGAAGGAGATACATAATTTAGACCTCTCCCCGAACATAAGCACTTATAATAATTTGATTGCTGCATATCTTACAGCCTGGAAGTGGGATAAAATGGAACGGACTTTCCAAATTCTGAAGTCAGGCCCTGTTAAACCTGACACCAATACATACCGGATAATGCTTCGTGGGTATGCTTATTCTGGTAATCTAGAGAAGATGGGAGAGACATATCAGATAGTAAGGGATTGCATAAATGAGCATGATGTTCCTTTGATCAGGGCAATGATATGTGCATATTGTAGAAGTTCTGTGCCTGATAGAGTTGATAAGATAGAGGAATTACTGAAGTTGATTCCAGAAAAGGAGTACAGGCCATGGTTAAATGTGTTGTTAGTTAAGCTTTATGCTCAAGAGGACTTGTTAGAGAAGATGGAGAATTCAATTAATGAAGCAATTGAGCACAAAGTCTCAATAATAACAACTGGTATAATGAAATGCATCCTTGCAACTTATTTTAGGAAGAATTTAGTGGAGAGGTTAGAAAATTTTGTGGAGTGTGCTGAAAGTTCTGGGTGGAAAATCTTCCGCTCCCTATACCATTGTAAGATGGTCATGTATGGATCACAAAAGCGCCTAGAGGAAATGGAAAATGTCCTGAATGAGATGGAAAGTGTCAACTTGCATACATCTAAGAGAACGTTGTTAATTATGTACAATGCTTATAGAAGCTGTGGTCAAAGATCCAAGGTTGAGAAATTATTGGGACTAATGTGCAAGCGTGGATATGAATTTCCTGAGAGTGCATTCCCATCCTAG 1542 0.4086 MKRVWKLSDAAQAELFCFHRTSAKLKPLNPLPVFLESFANYRCTHQVSTQAHPSGPSGLRDMAALFSRTPCYLSLLDRQVLTRKLEILGDELVRAAQDSDRVLKILDDNFDSLCRCYPDGSAFVELLDLLDSWPALALTVLNWRRKSSSGGIPMAPEEYSKGIKLAGRSRNIDLAVELFNEAANNLMKTTATYNALMGVYMFNGLADKCQSLFRQMKIDASCSPNIVTYNIIISVFGRLMLTNHVEATLKEIHNLDLSPNISTYNNLIAAYLTAWKWDKMERTFQILKSGPVKPDTNTYRIMLRGYAYSGNLEKMGETYQIVRDCINEHDVPLIRAMICAYCRSSVPDRVDKIEELLKLIPEKEYRPWLNVLLVKLYAQEDLLEKMENSINEAIEHKVSIITTGIMKCILATYFRKNLVERLENFVECAESSGWKIFRSLYHCKMVMYGSQKRLEEMENVLNEMESVNLHTSKRTLLIMYNAYRSCGQRSKVEKLLGLMCKRGYEFPESAFPS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0417 513 Gene3D Tetratricopeptide repeat domain 90 253 IPR011990 GO:0005515
Bisa03g0417 513 Gene3D Tetratricopeptide repeat domain 254 324 IPR011990 GO:0005515
Bisa03g0417 513 Gene3D Tetratricopeptide repeat domain 373 512 IPR011990 GO:0005515
Bisa03g0417 513 PANTHER EXPRESSED PROTEIN 38 512 IPR044179 GO:0003729
Bisa03g0417 513 Pfam PPR repeat family 189 236 IPR002885 -
Bisa03g0417 513 Pfam PPR repeat family 259 307 IPR002885 -
Bisa03g0417 513 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0417 Bisa-ChrBisa03 5274197 5276255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0417 192 402 Miscellaneous Gene Families AT4G11690 28.889 6.67e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0417 03 5274197 5276255 Bisa03g0417 03 5274197 5276255 ECH