Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0352 ATGGCTATGGTTGCAGTTGCTCTGCACCAGAACTTTCTCTGCTTCTCCAAATGGAAGACCATCACTTCAACGACGTCGCACGCTTCCATTCTTTTACATTCGCGAAAGAAGCCTCAATTTTCACCCATTTCCTGCTCTTCTTCCCAATCTTCTACTCCGCAGACCCCAGAAGCTAACACTGAAACCCCAGAATATTACGTCAATTCGGGTCTCCAACTCTTCTCCAAAGGACGGGTTAAAGATGCTTTAATCCAGTTTGAAACAGCTCTTTCTTTGGATCCCAATCCCATGGAGGCCCAAGCTGCTCTTTATAACAAAGCTTGCTGCCATGCATATCGAGGGGAAGGAAAGAAAGCTGCTGATTGTCTCCGCACTGCTCTGAGGGAATACAACCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCATCTTTCAGAGCTTTGCCTGAATTCAAAGAACTACAGGAAGAGGCCAGGCTGGGGGGAGAAGATATTGGCTCTAGTTTTCGGAGAGATCTAAAACTGATTAGTGAAGTTCAAGCACCATTTCGTGGGGTTAGGAGATTCTTCTATATAGCATTTACTGCAGCTGCAGGAATTTCAACGTTCTTTACTGTGCCCAGGCTCTTTCGTGCAATCAATGGTGGTGATGGTGCTCCTGATCTGTGGGAAACTGCTGGGAATGCAGCCATTAACGTTGGAGGTATCATTGTTCTTGTGGCATTATTCTTTTGGGATAATAAAAAAGAGGAGGAACAACTTGCACAGATATCCCGAGATGAGACACTATCAAGGCTGCCTTTGCGCCTTTCAACTAATCGTGTAGTGGAACTTGTGCAGCTACGGGACACAGTTAGGCCTGTTATATTAGCAGGGAAAAAAGAAACGATATCTTTAGCTTTGGAAAGGGCAGAGAGGTTTCGTACTGAGCTCCTTAGACGTGGTGTTCTGTTAGTTCCTATTGTTTGGGGAGAAGGTAGGGAAGCAAAAATCGAGAAGAAAGGTTTTGGTCTTCCAGCAAAGGCTGCCGCAACTCTTCCATCCATTGGGGAAGACTTTGATAAGCGAACACAGTCCATAGTCACAAAATCGAAGTTGAAAGCTGAAATTAGGTTCAAAGCTGAGGTTATATCACCAGCTGAATGGGAAAGGTGGATAAGAGAGCAGCAGAAGTCTGAAGGGGTTACTCCTGGTGAAGATGTCTATATTATACTGCGCTTAGATGGGCGGGTTCGAAGATCAGGGAAAGGTATGCCTGACTGGCAGCAAATTTTGAAGGAGCTGCCACCAATGGAAGCACTGCTAAGCAAGCTCGAAAGATGA 1326 0.4525 MAMVAVALHQNFLCFSKWKTITSTTSHASILLHSRKKPQFSPISCSSSQSSTPQTPEANTETPEYYVNSGLQLFSKGRVKDALIQFETALSLDPNPMEAQAALYNKACCHAYRGEGKKAADCLRTALREYNLKFGTILNDPDLASFRALPEFKELQEEARLGGEDIGSSFRRDLKLISEVQAPFRGVRRFFYIAFTAAAGISTFFTVPRLFRAINGGDGAPDLWETAGNAAINVGGIIVLVALFFWDNKKEEEQLAQISRDETLSRLPLRLSTNRVVELVQLRDTVRPVILAGKKETISLALERAERFRTELLRRGVLLVPIVWGEGREAKIEKKGFGLPAKAAATLPSIGEDFDKRTQSIVTKSKLKAEIRFKAEVISPAEWERWIREQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQILKELPPMEALLSKLER 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0352 441 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Bisa03g0352 441 MobiDBLite consensus disorder prediction 40 62 - -
Bisa03g0352 441 SMART tpr_5 100 133 IPR019734 GO:0005515
Bisa03g0352 441 SMART tpr_5 63 96 IPR019734 GO:0005515
Bisa03g0352 441 FunFam Protein LOW PSII ACCUMULATION 1, chloroplastic 48 156 - -
Bisa03g0352 441 SUPERFAMILY TPR-like 57 129 IPR011990 GO:0005515
Bisa03g0352 441 Pfam Low psii accumulation1 / Rep27 171 248 IPR021883 -
Bisa03g0352 441 Gene3D Tetratricopeptide repeat domain 59 158 IPR011990 GO:0005515
Bisa03g0352 441 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 46 439 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0352 03 4540775 4544301 Bisa03g0352 03 4540775 4544301 ECH