Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0346 ATGGAGTTGATGACTCATTCTTCAAGCTTCCTCTTGCCAAAAAAATCCTCGGAGGACCACAATTCTCCGGCCTACGCCCTTGTCGTTCTCAACCAGTGCCTCCCCAAATTCGCTCCTCTGCTCTGGGAGCACGCTCAGCTACGTGTGTGCGCCGATGGAGGTGCAAATCGGGTGTATGATGAAATGCCTCTGCTCTTGCCTCATGAAGATGCTTTGCAAGTCCGAAACAGGTACAAGCCGGATGTGATCAATGGTGACTTGGATTCGATCCGTACAGAAGTTATGGACTTCTATAAAAAACTGGGAACTAAGATAATCGATAAATCCCACGATCAGGATACCACAGACTTGCGCAAATGTGTAGCATATATATGTGACCTCACACCAAATATTGATATATCGACTATGTGCATTCTTGTTACTGGTGGACTAGGTGGGCGGTTTGATCATGAGATGGGAAATATCAATGTGCTATGCCATTTCTCTGACACACGAATTATCCTTCTATCCGATGATTGCCTCATTCATTTTCTTCCAAGGACTCACCGCCATAAGATCTACATTCAAGCTTCTGTGGAGGGTCCTCATTGTGGACTCATTCCCATTGGGACGCCATCTGGAAGTACTACTACCACTGGACTCCAGTGGAATCTCAGCCAGTCAATTCTTGCCCTCACTATTTACTCATTCTCGCAGCTTCCTCTTTCCCTACTCAAGACTGCCCAAGGGCATCCAATGTTGGTGGAACTGAAAAATGGGGAGACTTATAATGGTCATTTGGTTAACTGTGATAGATGGATGAACATCCATCTCCGTGAAGTCATATGTACCTTAAGGATGGAGATAGATTTTGGCGGATGCCTGAATGCTATATACGGGGTAATACAATCAAGTATCTTGGTTCCTGATGAGGTGTACCGCAAACCGCCTGGGGTGGGACGTGGAAGAGGAAGAGGTAGGGATGGTGGTGGTGGACGCCAAGTGAAAGGAAGTGGTAGTGGCATCGATGACGGCAGTACAAGGGGAGCAGGTGGAGGAGGCCGAGGCAGGGGCGGCTCTGGCGGAAAAGCTGGAGGAAACAGAGGGCAAGGAAGAGGCTGA 1101 0.4814 MELMTHSSSFLLPKKSSEDHNSPAYALVVLNQCLPKFAPLLWEHAQLRVCADGGANRVYDEMPLLLPHEDALQVRNRYKPDVINGDLDSIRTEVMDFYKKLGTKIIDKSHDQDTTDLRKCVAYICDLTPNIDISTMCILVTGGLGGRFDHEMGNINVLCHFSDTRIILLSDDCLIHFLPRTHRHKIYIQASVEGPHCGLIPIGTPSGSTTTTGLQWNLSQSILALTIYSFSQLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDRWMNIHLREVICTLRMEIDFGGCLNAIYGVIQSSILVPDEVYRKPPGVGRGRGRGRDGGGGRQVKGSGSGIDDGSTRGAGGGGRGRGGSGGKAGGNRGQGRG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0346 366 FunFam Thiamine pyrophosphokinase 23 165 - -
Bisa03g0346 366 Gene3D Thiamin pyrophosphokinase, catalytic domain 24 165 IPR036759 GO:0004788|GO:0005524|GO:0009229
Bisa03g0346 366 MobiDBLite consensus disorder prediction 306 366 - -
Bisa03g0346 366 PANTHER THIAMIN PYROPHOSPHOKINASE 4 223 - -
Bisa03g0346 366 Gene3D - 166 231 - -
Bisa03g0346 366 CDD LSm4 233 277 IPR034101 GO:0000398|GO:0000956
Bisa03g0346 366 Pfam LSM domain 237 278 IPR001163 -
Bisa03g0346 366 MobiDBLite consensus disorder prediction 309 323 - -
Bisa03g0346 366 Gene3D - 232 305 - -
Bisa03g0346 366 CDD TPK 26 202 IPR007371 GO:0004788|GO:0005524|GO:0009229
Bisa03g0346 366 ProSiteProfiles Sm domain profile. 233 305 IPR047575 GO:0003723
Bisa03g0346 366 SMART Sm3 236 282 IPR001163 -
Bisa03g0346 366 Pfam Thiamin pyrophosphokinase, catalytic domain 40 165 IPR007371 GO:0004788|GO:0005524|GO:0009229
Bisa03g0346 366 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 175 223 IPR036371 GO:0009229
Bisa03g0346 366 FunFam Thiamine pyrophosphokinase 167 231 - -
Bisa03g0346 366 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 183 221 IPR007373 GO:0009229|GO:0030975
Bisa03g0346 366 SUPERFAMILY Sm-like ribonucleoproteins 234 340 IPR010920 -
Bisa03g0346 366 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 19 174 IPR036759 GO:0004788|GO:0005524|GO:0009229
Bisa03g0346 366 NCBIfam thiamine diphosphokinase 27 226 IPR006282 GO:0004788|GO:0006772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0346 Bisa-ChrBisa03 4488511 4494009 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0346 03 4488511 4494009 Bisa03g0346 03 4488511 4494009 ECH