Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0313 ATGTCCCTCTTCCCTTCCTTCGTCCTCCTCCTCTCTCTCTTCTCCACCACTCTCTTTCACTGCCATGCCTTCCCTTCCCATTACTATCACCCCATACGCCATCGCCACCACACTCGTTTTGCCTCTCATAACTACAGAGATGCGCTCTCCAAATCCATCCTCTTCTTTGAAGGTCAGAGGTCAGGCAAGCTCCCTCCCAACCAGAGGATGATTTGGAGGAGGGACTCTGGTCTCTCTGATGGCTCTGCCATGCGTGTTGATTTGGTTGGGGGGTACTACGATGCAGGGGACAATGTCAAGTTCGGTTTTCCCATGGCATTCACCACCACCATGCTTTCCTGGAGTGTCATTGAGTTTGGTGGCCTAATGAAAGGTGAATTGCAGAACGCTAGAGAGGCCATTCGCTGGGCTACTGATTATCTTCTCAAAGCCACTGCACATCCAGACACCATCTATGTTCAGGTGGGAGATGCTAAGAAAGACCACGCTTGTTGGGAGAGACCTGAGGACATGGATACCCCAAGAAGTGTGTTTAAGATTGATAAGAACACACCGGGTTCAGAAGTGGCCGCTGAAACTGCTGCGGCTCTCGCTGCCGCTTCTCTGGTTTTCAGAAGAAGTGATCCCAGATACTCCGAAACTTTAATCAGAAGAGCTATTAGGGTGTTTCAGTTTGCTGATAGATACAGGGGATCCTACAGCAATGGCTTGAAGCCCATTGTTTGCCCCTTCTATTGCTCTTACTCTGGTTATCAGGATGAGCTATTGTGGGGTGCTGCTTGGCTGCACAAGGCCACCAAGAACCCAATATACCTCCATTACATTCAAGTTAATGGTCAGACCCTTGGGGCCGCAGAGTTCGACAACACCTTCGGGTGGGATAACAAGCATGCCGGAGCAAGGATACTTCTCTCCAAGGAATTTCTGGTTCAGAGGGTACAATCCCTCCATGAATACAAGGGTCATGCAGACAATTTCATCTGCTCTCTCATTCCTGGAGCTTCTTTCTCTTCAGCCCAGTATACACCAGGTGGGCTCCTGTTCAAGATGAGCGATAGCAACATGCAGTATGTAACGTCCTCTTCATTTCTACTCTTAGCCTACGCCAAATACTTGACCTCCTCCCACATGGTCGTTAATTGTGGTGGAACCCCCGTCACCCCTAAGAGACTCCGATCCATAGCCAAGAAACAGGTGGATTACTTGCTAGGAGACAACCCATTGAAGATGTCGTACATGGTGGGGTATGGTTTAAGGTACCCACGGAGGATTCATCACAGGGGCTCATCTCTGCCGTCCATTGCTGTACACCCCGCGAAGATCCAATGCTCAGCAGGGTTCGGCGTGATGAACACACAGTCTCCCAACCCCAACGTTCTGGTGGGTGCCGTTGTGGGTGGACCCGACCTTCATGACAGGTTCCCTGATGAAAGGTCAGATTATGAACAATCAGAGCCAGCCACTTACATCAACGCACCGCTTGTGGGCGCTCTGGCTTATCTTGCTCACTCCTTCGGCCAACTCTAG 1527 0.5056 MSLFPSFVLLLSLFSTTLFHCHAFPSHYYHPIRHRHHTRFASHNYRDALSKSILFFEGQRSGKLPPNQRMIWRRDSGLSDGSAMRVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELQNAREAIRWATDYLLKATAHPDTIYVQVGDAKKDHACWERPEDMDTPRSVFKIDKNTPGSEVAAETAAALAAASLVFRRSDPRYSETLIRRAIRVFQFADRYRGSYSNGLKPIVCPFYCSYSGYQDELLWGAAWLHKATKNPIYLHYIQVNGQTLGAAEFDNTFGWDNKHAGARILLSKEFLVQRVQSLHEYKGHADNFICSLIPGASFSSAQYTPGGLLFKMSDSNMQYVTSSSFLLLAYAKYLTSSHMVVNCGGTPVTPKRLRSIAKKQVDYLLGDNPLKMSYMVGYGLRYPRRIHHRGSSLPSIAVHPAKIQCSAGFGVMNTQSPNPNVLVGAVVGGPDLHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSFGQL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0313 508 PANTHER ENDO-1,4-BETA-GLUCANASE 31 503 - -
Bisa03g0313 508 FunFam Endoglucanase 41 506 - -
Bisa03g0313 508 Pfam Glycosyl hydrolase family 9 45 498 IPR001701 GO:0004553|GO:0005975
Bisa03g0313 508 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 401 427 IPR018221 -
Bisa03g0313 508 SUPERFAMILY Six-hairpin glycosidases 42 506 IPR008928 GO:0005975
Bisa03g0313 508 Gene3D - 40 508 IPR012341 GO:0005975
Bisa03g0313 508 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 474 492 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0313 Bisa-ChrBisa03 4200315 4202543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0313 1 504 Glycoside Hydrolase AT1G02800 76.238 0.0 779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0313 03 4200315 4202543 Bisa07g1690 07 42818090 42820293 CCT
Bisa03g0313 03 4200315 4202543 Bisa03g0313 03 4200315 4202543 ECH