Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0312 ATGTCTCAGCGTAAGCTTGGTCGAATTCCCAGCATCAGAGACCGAGTAGAGGATACTCTCTCGGCTCACCGCAACGAACTCGTTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAACGGATTTTGCAACCCCATAATTTGATTGATGAGCTGGAAAATATCCTGGGTGAGGATGAAGCATCACAGGACCTGAGAAATGGTCCCTTTGGCGAAATCCTCAAGTCCGCACAGGAAGCCATAGTGTTCCCTCCATTTGTGGCAATAGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTTTGAACTCAGTGTGGAGCAATTGAGCATCCCTGAATATCTTCACTTCAAAGAAGACCTTGTAGATGGAACGGTTAATGATAATTTTGTATTGGAGCTTGATTTTGAGCCATTCAATGCTTCATTTCCTCGTCCTTCCCGTTCATCTTCCATTGGCAATGGTGTTCAATTTCTTAATCGTCACCTTTCTTCGAGTATGTTTCGCAACAAGGATTCTTTGGAGCCGTTGCTTGATTTCCTTCGAGTTCACAAATATAAAGGGCATGCACTAATGTTAAATGACCGTATCCAAACCATCTCTAAACTTCAGTCTGCTTTGGTCAAGGCTGAGGATTATCTTTCCAAGCAAAAACCTGATACAGACTATTCTGAGTTCGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGATGGGGTGATACTGCTGAACGAGTATTGGAGATGATGCATCTTCTTTTGGACATTCTGCAGGCTCCTGATCCTTCTACCCTTGAGACTTTTCTTGGGAGAGTACCTATGGTGTTTAATGTTGTTATATTATCTCCTCATGGTTACTTTGGGCAAGCCAATGTCTTGGGTTTGCCAGACACCGGTGGGCAGGTTGTTTATATATTGGATCAAGTGCGTGCCCTCGAGAACGAGATGCTTCTTAGAATAAAAAAGCAAGGACTGGATTTCACCCCTAGAATTCTAATTGTTACCAGGTTGATACCCGATGCAAAGGGAACAACATGCAACCAGCGGCTAGAAAGGGTCAGTGGTACTGAACACACTCATATTTTGCGAGTTCCTTTCAGATCAGATAATGGAACTCTTCGCAAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTGCAGGGTTATCCTGATTTCATCATTGGAAACTACAGTGATGGAAATCTTGTTGCATCTTTATTAGCTTATAAAATGGGAGTTACACAGTGCACAATTGCGCATGCACTGGAGAAAACAAAATATCCAGATTCAGATATATATTGGAAAAAGTTTGAAGATAAATATCATTTTTCATGCCAATTCACTGCTGACCTAATAGCTATGAACAATGCTGATTTTATCATCACCAGTACATATCAAGAGATTGCAGGAACGAAGAATACAGTTGGCCAGTATGAGAGCCACACTGCTTTTACTCTTCCCGGGCTCTACAGGGTTGTCCATGGCATTGATGTTTTTGATCCTAAGTTCAATATTGTCTCTCCTGGAGCAGATATGAGCATATATTTTCCCTACTCTGAAAAGCAGAAAAGACTTACGGCCCTGCATGGTTCAATTGAAAAGTTGTTATATGATCCTGAGCAGACTGATGAATACATCGGTACACTTAAAGACCGGTCAAAGCCTATAATTTTTTCCATGGCAAGGTTAGATAGAGTGAAAAACATAAGTGGTTTGGTGGAAAGCTATGCCAAGAACAGCAAATTGAGGGAACTTGTCAACCTCGTGGTGGTAGCTGGCTATATCGATGTAAAGAAGTCCAGGGACAGAGAAGAAATTGCAGAAATTGAGAAAATGCATGATCTCATGAAGAAATATAACTTAGATGGCGATTTCCGGTGGATTACTGCCCAAACAAATAGAGCACGTAATGGAGAACTGTATCGCTATATCGCAGACACAAAAGGTGCTTTTGTTCAGCCTGCTTTCTATGAAGCTTTTGGGCTTACAGTTGTGGAGGCCATGACTTGTGGGCTCCCCACATTTGCTACTTGCCATGGTGGTCCTGCCGAGATAATTGAGCATGGTATATCAGGATTCCATATTGATCCTTATCATCCTGATCAAGCTTCTGCCGTGTTGCTTGATTTCTTCCAACGATGCAAGGACGATCCAAGCCACTGGGATAAAATATCTAATGGTGGTCTTCAAAGAATCTATGAAAGGTACACATGGAAGATCTATTCTGAAAGGCTTATGACCTTGGCGGGAGTGTATAGTTTCTGGAAGTACGTGTCCAAACTAGAGAGGCGTGAAACCCGACGATATCTTGAGATGTTCTACATTCTTAAGTTCCGCGATCTGGCAAAGTCTGTTCCGCTAGCTAAGGATGATGCAAACTGA 2436 0.4253 MSQRKLGRIPSIRDRVEDTLSAHRNELVSLLSRYVAQGKRILQPHNLIDELENILGEDEASQDLRNGPFGEILKSAQEAIVFPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSIPEYLHFKEDLVDGTVNDNFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSSMFRNKDSLEPLLDFLRVHKYKGHALMLNDRIQTISKLQSALVKAEDYLSKQKPDTDYSEFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSDNGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQKRLTALHGSIEKLLYDPEQTDEYIGTLKDRSKPIIFSMARLDRVKNISGLVESYAKNSKLRELVNLVVVAGYIDVKKSRDREEIAEIEKMHDLMKKYNLDGDFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGISGFHIDPYHPDQASAVLLDFFQRCKDDPSHWDKISNGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLAKSVPLAKDDAN 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0312 811 Gene3D - 148 277 - -
Bisa03g0312 811 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
Bisa03g0312 811 FunFam Sucrose synthase 3 394 520 - -
Bisa03g0312 811 Gene3D Glycogen Phosphorylase B; 282 799 - -
Bisa03g0312 811 Gene3D Glycogen Phosphorylase B; 529 756 - -
Bisa03g0312 811 FunFam Sucrose synthase 148 277 - -
Bisa03g0312 811 NCBIfam sucrose synthase 24 805 IPR012820 GO:0005985|GO:0016157
Bisa03g0312 811 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 765 - -
Bisa03g0312 811 FunFam Sucrose synthase 529 756 - -
Bisa03g0312 811 PANTHER - 8 808 IPR012820 GO:0005985|GO:0016157
Bisa03g0312 811 Gene3D - 11 147 - -
Bisa03g0312 811 Pfam Glycosyl transferases group 1 566 740 IPR001296 GO:0016757
Bisa03g0312 811 CDD GT4_sucrose_synthase 280 765 - -
Bisa03g0312 811 FunFam Sucrose synthase 11 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0312 Bisa-ChrBisa03 4192123 4198628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0312 1 809 Glycosyltransferase AT4G02280 84.302 0.0 1450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0312 03 4192123 4198628 Bisa03g0312 03 4192123 4198628 ECH