Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0277 ATGGCCCTCAATACTCCCTCCCACAATACTCCCGAAAAGAAGCACTGGTGGCTTACCAACCGTAAGATTGTAGAAAAATACATAAAAGACGCTCGCAGCCTGATTGCGAGCCAAGAACAGAGCGAGATCGCTTCGGCTCTGAACCTTCTAGACGCGGCTCTAGCTATCTCTCCGCGCCTCGACCAAGCCCTGGAGCTCAAAGCCAGGTGTTTGCTGTTTCTGCGGCGGTTCAAGGAGGTGGCGGATATGCTTCAAGACTGCATTCCGAGCCTGAAAATGGGAAACGAAGACTCAGCGTCTGCTTCCTTTTCTTCTGATAATTCTTCTCACCATCTTTCGAGGGAAGGGGTCAAGCTCCTCTCCTTCTCCTCAGAGTTGCCAGTTCGGGATCAGACTCATCAGAGTTTCAAGTGCTTCTCTGTCTCAGACTTGAGGAGGAAGGTCATGGCAGGGCTGAGTAAAAGTTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGCAAAGCATGCTGCCATCTAGGTCTAATGGAGGATGCAATGTTTCTTCTCCAAACGGGTAAACGCCTTGCCAGCGACGCCTTCCGCCGGGAGAGCGTTTGCTGGTCCGACGACAGCTTCTCCTTATCCAGCATTCCTTCCTCCATCGACACCGCTAATCCGCCCACCACTTCTCCCCGAACACCTCTCACGGAGTCCGAGAGCGTCACCCAACTCCTCAGCCACATCAAGCTCCTCCTCCGTCGTCGCACGGCAGCCCTCGCTGCCCTTGACGCGGGTCTCTACTCCGAAGCCATCAGACATTTCTCCAAAATCGTCGACGGCCGCCGTGGCGCCCCGCAAGGCTTTCTCGCCGATTGCTATATGCACAGAGCCGCCGCCTACCGCTCCGCCGGTCGAATTGCAGAGTCCATTGCCGATTGTAACCGGACCCTCGCTCTTGATCCCTCTTGCATTCAAGCTCTCGAGACCAGAGCTTCCCTTCTGGAATCAATTCGATGCTTGCCCGATTGCTTGCATGATCTTGAACACTTGAAGCTACTGTACAATACGATCCTTCGGGATCGAAAGCTTCCGGGTCCTGCTTGGAAGCGTCACAACGTGAGGTACAGAGAGATTCCTGGGAAACTCTGCGCGCTCACCACAAAAATTCAAGAACTGAAGCAAACGATGGCTTCTGGAGAAACTAGTAACGTGGATTACTATACTCTGATTGGGTTGCGACGTGGATGTACTAGATCAGAGCTGGGAAGGGCTCATCTTTTGCTCTGCTTACGACACAAGCCTGACAAAGCCACCAACTTTATTGATCGCTGCGAGCTAGCGGACGAACGTGACCTTGAATCGGTTAAGGACAGAGCAAAAATGTCAGCTTTATTACTGTACAGATTGCTTCAGAAGGGTTACACAAGTGTAATGACTACAATCATGGATGAGGAAGCTACTGAAAAACAGAGAAAGAGAGCTGCGGCTGCTTTACAAGCTGCTGAGTCCAGATTGGAGTCTGATTCCAATGTGTCTGAGAAATTGAGTGGTAATCGGAGCAATTGTTCGATGGAAAATAAAGCTACAGCATCTTCCACCACAGCTAATTCGTCGGTTTTCCAAGGTGTATTTTGCCGTGATCTTGCTGTGGTAGGGAATATGCTTTCGCAAGCAGGATTTAACCATCCAATTCCGGTGAAGTATGAGGCATTGAGCTGCTGA 1707 0.5114 MALNTPSHNTPEKKHWWLTNRKIVEKYIKDARSLIASQEQSEIASALNLLDAALAISPRLDQALELKARCLLFLRRFKEVADMLQDCIPSLKMGNEDSASASFSSDNSSHHLSREGVKLLSFSSELPVRDQTHQSFKCFSVSDLRRKVMAGLSKSCDKEGQWRYLVLGKACCHLGLMEDAMFLLQTGKRLASDAFRRESVCWSDDSFSLSSIPSSIDTANPPTTSPRTPLTESESVTQLLSHIKLLLRRRTAALAALDAGLYSEAIRHFSKIVDGRRGAPQGFLADCYMHRAAAYRSAGRIAESIADCNRTLALDPSCIQALETRASLLESIRCLPDCLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQTMASGETSNVDYYTLIGLRRGCTRSELGRAHLLLCLRHKPDKATNFIDRCELADERDLESVKDRAKMSALLLYRLLQKGYTSVMTTIMDEEATEKQRKRAAAALQAAESRLESDSNVSEKLSGNRSNCSMENKATASSTTANSSVFQGVFCRDLAVVGNMLSQAGFNHPIPVKYEALSC 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0277 568 SUPERFAMILY TPR-like 252 346 IPR011990 GO:0005515
Bisa03g0277 568 Coils Coil 479 499 - -
Bisa03g0277 568 MobiDBLite consensus disorder prediction 500 520 - -
Bisa03g0277 568 Gene3D Tetratricopeptide repeat domain 217 358 IPR011990 GO:0005515
Bisa03g0277 568 SMART tpr_5 285 318 IPR019734 GO:0005515
Bisa03g0277 568 SUPERFAMILY Chaperone J-domain 395 434 IPR036869 -
Bisa03g0277 568 CDD DnaJ 400 434 IPR001623 -
Bisa03g0277 568 MobiDBLite consensus disorder prediction 213 232 - -
Bisa03g0277 568 Gene3D DnaJ domain 383 523 IPR036869 -
Bisa03g0277 568 PANTHER OS01G0273500 PROTEIN 9 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0277 Bisa-ChrBisa03 3728211 3730538 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0277 03 3728211 3730538 Bisa07g1657 07 42367286 42369702 CCT
Bisa03g0277 03 3728211 3730538 Bisa03g0277 03 3728211 3730538 ECH