Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0150 ATGCCCTACTCCGCCATTTTTCAGGGTTTTATCAGAACCACCACTTCTGCTTCAACCCCTTTTCCCACCATGTCACTCAAAGGTCCCATTTTCCTCTCATCCCACATAATTCGTAGAGCTCGAAGACCTTCTTCGCTTTTCTCCATTTCCATGAGACATCAGGCGCTTGGGTTGAGGAGTTTTTATGTTCCTGCAAAAATAAGGTCTCAACTTGGTGTTGTGGGCTCAGTGGCGCCTTGCAGGGCGACTGAGGTGGATCGGAGAGAAAGGCAAGGTGTGGGCTTAAGGCGAAGGAGCATCGCTTTGCCGTTTTGGCATCAGCAAAGCTCCAATTATGGTCGTTTTGCTTACCATGATGTGTCTAGTGATGATTCCGATGTGGAATTGGGGTCTTCTCAGCAACAATTGGGTGGTTCTGGTTCATCCCTTGATAACATTGATGAATGGAGATGGAAATTGACCATGCTTCTTCGCAACAAAGATGAGCGAGAGGTATTGTCAAGGGAGAGAAAGGACAGACGTGATTTTGAGCATCTTTCAGCTTTAGCAACTAGGATGGGTTTATATAGCCGACAATATGCAAAAGTAGTTGTATTTAGCAAAGAACCTCTGCCAAATTACAGATCTGATCTGGATGAAAAGCGTCCACAGAGGGAGGTTATCTTACCTTTTGGTGTTCATAGAGAAGTAGATTCTCATCTCATTGCTCATCTTTCGAAAAAGTCTACAAGCCTGGGAGGCTTTTGGGATAAATCCTTGCATAGATCAAGTAGTTTTAGTATTCCTGCTGATGAATATAAATATGAGGAGCCAGAGCCCATGGCACAGAAGAGTGTTGTCGCAGAGAAAATGCTCCGACGAAAAAGTTTTCAACTACGTTATCAACAACAAGAATGGCAGGAATCTCCTGAAGGGCAAAAGATGCTTGAATTTCGTAGAAGTCTTCCTGCATTCAAAGCGAAGGAGCCATTATTGAAAACCATTTCAGAGAATCAGGTTGTTGTGGTCTCAGGTGAAACTGGTTGTGGTAAGACCACACAACTTCCTCAGTATATATTAGAGTCTGAGATTGAAGCTGCACATGGAGCTGTCTGTAGCATAATTTGTACTCAGCCTAGAAGAATATCTGCAATGTCTGTTTCTGAAAGAGTTGCAGCAGAACGTGGGGAGAAATTGGGAGAATCTGTCGGTTACAAGGTTCGACTGGAAGGTATGAAAGGAAGGGATACTCGTCTTCTTTTTTGCACTACAGGTGTATTGTTGCGGAGACTACTTGTGGATAGAAATCTGAAAGGTGTAAGTCATGTCATTGTTGATGAAATTCATGAACGTGGGATGAATGAAGATTTTCTTCTTGTTGTCCTGAAAGATCTTCTTCCGCGTCGTCCAGATCTGAGGTTAATTTTGATGAGTGCAACCTTAAATGCTGAGCTTTTTTCTTCCTATTTTGGTGGGGCTCCAACTATACATATTCCTGGTTTTACATATCCAGTTCGAGCACAATTTCTTGAGGATATTCTGGAGATGTCTGGATACCGGTTGACTTATTATAATCAAATTGATGACTATGGTCAAGAGAAGACATGGAAAATGCAAAAACAAGCTCAAGCTTCCAGAAAAAGAAAGACACAGATTGCTTCTGCTGTTGAGGATGCATTGGAAGCTGCAGACTTCAAGGGCTATAGCATACGCACCCGAGAGTCATTATCCTGCTGGAGCCCTGATTCAATTGGTTTTAACCTTATTGAACACATGCTTTGCCACATTGTCAAGAATGAGAGGCCAGGCGCAGTTTTGGTTTTTATGACTGGTTGGGATGACATAAACTCTTTGAAGGATCAGCTTCAAGCTCATCCCTTGTTGGGTGATCCTAGTAAAGTATTGCTTCTTGCATGCCATGGCTCCATGGCTAGCTCCGAGCAGAGGTTAATCTTTGAAAATCCTGAAGGAGGAGTGAGGAAAATAGTTCTTGCCACTAATATGGCTGAGACTAGTATTACCATTAATGATGTTGTCTTTGTGATTGATTGTGGAAAAGCAAAAGAAACATCTTATGATGCACTAAATAACACTCCTTGTTTGCTTCCATCTTGGATCTCAAAGGCAGCTGCTCGGCAGAGAAGAGGAAGGGCGGGTCGTGTTCAACCTGGCGAATGTTACCATCTTTATCCTAGATGTGTTTATGATGCTTTTGCTGATTATCAATTGCCAGAGCTTTTAAGAACACCTTTGCAGTCCTTATGTCTTCAAATCAAAAGTTTAAATCTTGGAAGTATTTCAGAATTCCTATCCAGAGCTCTGCAACCACCAGAGCCTCTATCGGTTCAAAATGCTATTGAATATTTGAAGATTATTGGGGCCTTGGATGAGGATGAAAATCTGACAATTCTAGGCCGTAACTTGTCAATGCTTCCTGTAGAGCCCAAACTTGGCAAGATGCTTATCTTAGGAGCTATCTTCAACTGTTTAGATCCCATAATGACTGTTGCTGCTGGTCTGAGTGTAAGAGATCCATTCATGATGCCGTTTGACAAGAAGGATCTTGCAGAGTCTGCAAAGGCCCAGTTTGCTGGTCGTGCCCATAGTGATCATCTTGCACTTGTCCGGGCTTATGAGGGTTGGAAAGATGCAGAAGCACAGAAAGCTGGTTATGATTACTGTTGGAGAAATTTCCTTTCCTCACAAACACTTAGGGCTATTGACTCTCTTCGAAAGCAATTCTTTTACTTGCTTAAAGATATTGGTTTGGTTGATCACAGTACTGACAACTGGAATGCATTGAGTCATGATGAGCATCTGGTTCGGGCAGTCATCTGTGCGGGTTTGTTTCCCGGAATATGCTCTGTTGTGAACAAAGAGAAGTCAATAGCATTGAAAACAATGGAGGATGGTCAGGTTCTTCTGTATGCTAACTCTGTAAATGCCAGTGTACCCAGAATTCCATTCCCGTGGCTGGTTTTCAATGAAAAGGTGAAGGTGAATTCAGTATTCCTCCGGGATTCAACTGGTATATCTGATTCAATGCTGCTCCTATTTGGTGGAAACGTGTCCAGAGGTGGACTTGATGGTCACCTGAAAATGCTGGGGGGTTATTTGGAGTTTTTCATGAAACCTGCATTAGCCGAGACTTACTTAAGCCTAAAGAGGGAGACGGACGAATTAATACATAAAAAACTTCTGGATCCCAAGTTGGATTTGCAATCATATAACGAGCTTCTTTCAGCTGTAAGGTTGTTGGTATCAGAAGATCAGTGTGATGGCAAATTTGTCTTCGGTCGCCAGGTGCTATCACCGTCAAAGAAGGAAAAGGACTCCAAAAGTGGTGCAGGTATTGGGGGTGATAATTCTAAAAACCAGCTGCAAACATTGCTTGCCAGGGCTGGACATGATGCACCAACCTACAAAACTAAACAACTGAAAAACAACCAATTCCGGTCAACTGTCACGTTCAATGGCTTGAATTTTGTTGGTCAGCCTTGCAACAGCAAGAAACTAGCAGAAAAGGGTGCTGCTGCTGAGGCTCTTCTATGGTTAAAGGGGGATACACATTCCTCTCGTGATGATATTGACCATATGTCTACGCTCCTCAAAAAGAGCAAGAAGAAAAATAGGCAAACTTCAGTTAATTGTTCTAAAAGAAGAGCTCAATGA 3651 0.4265 MPYSAIFQGFIRTTTSASTPFPTMSLKGPIFLSSHIIRRARRPSSLFSISMRHQALGLRSFYVPAKIRSQLGVVGSVAPCRATEVDRRERQGVGLRRRSIALPFWHQQSSNYGRFAYHDVSSDDSDVELGSSQQQLGGSGSSLDNIDEWRWKLTMLLRNKDEREVLSRERKDRRDFEHLSALATRMGLYSRQYAKVVVFSKEPLPNYRSDLDEKRPQREVILPFGVHREVDSHLIAHLSKKSTSLGGFWDKSLHRSSSFSIPADEYKYEEPEPMAQKSVVAEKMLRRKSFQLRYQQQEWQESPEGQKMLEFRRSLPAFKAKEPLLKTISENQVVVVSGETGCGKTTQLPQYILESEIEAAHGAVCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRNLKGVSHVIVDEIHERGMNEDFLLVVLKDLLPRRPDLRLILMSATLNAELFSSYFGGAPTIHIPGFTYPVRAQFLEDILEMSGYRLTYYNQIDDYGQEKTWKMQKQAQASRKRKTQIASAVEDALEAADFKGYSIRTRESLSCWSPDSIGFNLIEHMLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSKVLLLACHGSMASSEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLNLGSISEFLSRALQPPEPLSVQNAIEYLKIIGALDEDENLTILGRNLSMLPVEPKLGKMLILGAIFNCLDPIMTVAAGLSVRDPFMMPFDKKDLAESAKAQFAGRAHSDHLALVRAYEGWKDAEAQKAGYDYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVDHSTDNWNALSHDEHLVRAVICAGLFPGICSVVNKEKSIALKTMEDGQVLLYANSVNASVPRIPFPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNVSRGGLDGHLKMLGGYLEFFMKPALAETYLSLKRETDELIHKKLLDPKLDLQSYNELLSAVRLLVSEDQCDGKFVFGRQVLSPSKKEKDSKSGAGIGGDNSKNQLQTLLARAGHDAPTYKTKQLKNNQFRSTVTFNGLNFVGQPCNSKKLAEKGAAAEALLWLKGDTHSSRDDIDHMSTLLKKSKKKNRQTSVNCSKRRAQ 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0150 1216 SMART ultradead3 288 501 IPR014001 -
Bisa03g0150 1216 Gene3D - 576 733 IPR027417 -
Bisa03g0150 1216 FunFam DExH-box ATP-dependent RNA helicase DExH3 577 733 - -
Bisa03g0150 1216 FunFam DExH-box ATP-dependent RNA helicase DExH3 268 493 - -
Bisa03g0150 1216 CDD SF2_C_RHA 562 723 - -
Bisa03g0150 1216 Gene3D - 265 493 IPR027417 -
Bisa03g0150 1216 MobiDBLite consensus disorder prediction 1197 1216 - -
Bisa03g0150 1216 Pfam Helicase conserved C-terminal domain 584 714 IPR001650 -
Bisa03g0150 1216 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 934 1016 IPR011709 -
Bisa03g0150 1216 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 434 443 IPR002464 -
Bisa03g0150 1216 FunFam Putative ATP-dependent RNA helicase DHX36 757 861 - -
Bisa03g0150 1216 SMART helicmild6 609 715 IPR001650 -
Bisa03g0150 1216 CDD DEXHc_RHA-like 331 491 - -
Bisa03g0150 1216 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 581 755 IPR001650 -
Bisa03g0150 1216 SMART ha2_5 777 868 IPR007502 GO:0004386
Bisa03g0150 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 321 894 IPR027417 -
Bisa03g0150 1216 Pfam Helicase associated domain (HA2) 778 855 IPR007502 GO:0004386
Bisa03g0150 1216 Pfam Double-stranded RNA binding motif 1116 1178 IPR014720 -
Bisa03g0150 1216 SMART DRBM_3 1116 1179 IPR014720 -
Bisa03g0150 1216 Gene3D - 1102 1183 - -
Bisa03g0150 1216 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 325 492 IPR014001 -
Bisa03g0150 1216 PANTHER ATP-DEPENDENT RNA HELICASE 269 1063 - -
Bisa03g0150 1216 MobiDBLite consensus disorder prediction 1194 1216 - -
Bisa03g0150 1216 Gene3D - 757 870 - -
Bisa03g0150 1216 Pfam DEAD/DEAH box helicase 325 476 IPR011545 GO:0003676|GO:0005524
Bisa03g0150 1216 SUPERFAMILY dsRNA-binding domain-like 1111 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0150 Bisa-ChrBisa03 1846839 1857963 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0150 03 1846839 1857963 Bisa03g0150 03 1846839 1857963 ECH