Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0145 ATGGGGTTATGCAGAAAGGACATTGCGAAAGAAGCAAAGAAGCAGCTATGGCTGGCAGGGCCTATGACTTCTGTGGGTCTGTTTCAGTATAGTCTACAAATAATACCTCTGATGTTTGTGGGTCATCTTGGAGAGTTGCCTCTCTCTGGTGCTTCAATGGCTACTTCATTTCTCAATGTCACTGGCTTCGGTGTGTTGAGGGGAATGGCAAGTGCCCTTGACACATTTTGTGGACAATCATATGGAGCAGAGCAGGATCATATGCTTGGCATACACATGCAGAGAGGCATGCTGGTTATATTACTTGTTACTCTAGCTCAGTCTATTATTTGGGCAAACTTGAGGCCTATTCTGGTTGTTCTGCATCAAAACCACAATATTGCAAATGAAGCTGGAGTATACGCTTGTTACATGATTCCAAGCCTTTCTGCCAATGGTATTCTTCAGTGCAACATTAAGTTCTTGCAAAATCAGAACATAGTCTTTCCTATGGTTCTAACGACTGGAATCACCAGCTTAATGCACATTCTTTTCTGTTGGGGTTTGGTCCTAAAGTCTGGGCTTGGCATCAAAGGAGCTGCTCTGGCAGTCTGCATTTCTAATTGGATTAGTATGCTACTGCTAGCACTTTATATCAAGTACTCTTCTTCATGCAAAAGAACTTGGACTGGCTTTTCTAGAGAATCCTTGCATAATATCCCCCAGTTTCTCCGACTTGCTCTTCCTTCAGCTCTCATGGTCTGCTTAGAATCATGGACCTTTGAACTAATGGTGATCTTGTCTGGTACTTTTCCTAATCCAAAACTGGAAACTTCTGTTTCTTCTATATGCCTTAATACATCTCTCATATTTTGGATGATACCCTACGGAATTAGTGCTGCTGCCAGTACGAGGATCTCAAATGAACTAGGGGCTGGCTGTCCAAAAGCAGCATATTTAGCTGTCAAAGTCGCCTTATTCTTTAGCCTCACCGCGGGAGTTCTAGAATCTTCTCTGCTAATGCTAATAAGGAACATTTGGGGTGGTGCTTTTACCAATGTACATGAAGTGGCGAGATATGTAGCAATCATGATCCCAATTATTGCAAGCGTCACCTTTCTGGATTCAGTTCAAACTGTACTCCAAGGTATTGCTAGAGGATGTGGTCGGCAAAAACTTGGTGCATTTGTCAATCTTGGCTCATATTATCTTGTGGGCGTTCCTTTTGCCATAGTGTTTGCCATTGTCTTCCACATGACAGTAAAGGGCCTTTGGTTAGGGATCACTATAGCACTTGCCACGCAAGTGGTATGTCTTCTTCTCGTTACCGCATGCACCAACTGGGAGAAAGAAGTAAGTCTTCCTGCTACATTCAATTCTCTAACGTGCATCTTATGTTCAATGAAAAATATTTGTTCAAATTCAACTTCAACAATGACTTCTGCAAACAACAGATATAGCAAGGGCTCAAGAAAACGCCCTCACGAGTAG 1470 0.4259 MGLCRKDIAKEAKKQLWLAGPMTSVGLFQYSLQIIPLMFVGHLGELPLSGASMATSFLNVTGFGVLRGMASALDTFCGQSYGAEQDHMLGIHMQRGMLVILLVTLAQSIIWANLRPILVVLHQNHNIANEAGVYACYMIPSLSANGILQCNIKFLQNQNIVFPMVLTTGITSLMHILFCWGLVLKSGLGIKGAALAVCISNWISMLLLALYIKYSSSCKRTWTGFSRESLHNIPQFLRLALPSALMVCLESWTFELMVILSGTFPNPKLETSVSSICLNTSLIFWMIPYGISAAASTRISNELGAGCPKAAYLAVKVALFFSLTAGVLESSLLMLIRNIWGGAFTNVHEVARYVAIMIPIIASVTFLDSVQTVLQGIARGCGRQKLGAFVNLGSYYLVGVPFAIVFAIVFHMTVKGLWLGITIALATQVVCLLLVTACTNWEKEVSLPATFNSLTCILCSMKNICSNSTSTMTSANNRYSKGSRKRPHE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0145 489 NCBIfam MATE family efflux transporter 24 418 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bisa03g0145 489 Pfam MatE 22 180 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bisa03g0145 489 Pfam MatE 242 404 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bisa03g0145 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 441 - -
Bisa03g0145 489 CDD MATE_eukaryotic 11 446 IPR045069 GO:0042910|GO:1990961
Bisa03g0145 489 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0145 Bisa-ChrBisa03 1773212 1793581 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0145 03 1773212 1793581 Bisa03g0145 03 1773212 1793581 ECH