Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3996 ATGTTGAAGCTAGTGGCAGGGTTAATAGCATTGGTGATTGCCAAACAAGTGAGCAGTCAAAATTGTGGGTGTGATGCAGGGTTATGTTGCAGTCAATACGGATATTGCGGAACAGGTGATGCTTATTGTGGCTTAAATTGCCAAGAAGGTCCTTGTTATACACCCTCCATCAACAATGTTTCTGTGGCTGATTTCGTCACTTCGGAGTTCTTTGATGCTATAATCAATGACGCAGATTTTGAATGTGCCGGCAAGAATTTTTACTCACGACATGCTTTCCTTCAGGCTCTCAATTCCTACAATAAATTTGGCAGGATTGGTTCTGTATATGACTCCATGCGTGAGATTGCTGCTGCTTTTGCCCATTTCACCCACGAAACAGGACATTTTTGCCACATAGAAGAGATAGATGGTGTGTCCAAGGATTATTGTGATGAAAATGACACACAGTACTCGTGTGCCCCCAACAAAGGGTACCATGGTCGTGGACCCATCCAGCTATCTTGGAACTTCAACTACGGACCAGCAGGACAAAGCAATGGGTTCGATGGATTGAACTCTCCGGAAACAGTGGCCAATGATGCAGTCGTGTCCTTCAAGACAGCATTATGGTACTGGATGCAACACGTGCGCCCAGTGATCAACCAAGGGTTTGGGGCTACCATTAGAGCCATCAATGGTCCACTTGAATGTGATGGTGCCAGCCCTGACAGAGTTCAATCGCGCCTTAATTATTATACTCAATATTGTTTACGATTGGGTGTTTATCCTGGTCATAATTTATCTTGTTAG 792 0.4444 MLKLVAGLIALVIAKQVSSQNCGCDAGLCCSQYGYCGTGDAYCGLNCQEGPCYTPSINNVSVADFVTSEFFDAIINDADFECAGKNFYSRHAFLQALNSYNKFGRIGSVYDSMREIAAAFAHFTHETGHFCHIEEIDGVSKDYCDENDTQYSCAPNKGYHGRGPIQLSWNFNYGPAGQSNGFDGLNSPETVANDAVVSFKTALWYWMQHVRPVINQGFGATIRAINGPLECDGASPDRVQSRLNYYTQYCLRLGVYPGHNLSC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3996 263 ProSitePatterns Chitinases family 19 signature 2. 197 207 IPR000726 GO:0004568|GO:0006032|GO:0016998
Bisa02g3996 263 ProSitePatterns Chitin recognition or binding domain signature. 24 43 IPR018371 GO:0008061
Bisa02g3996 263 ProSitePatterns Chitinases family 19 signature 1. 82 104 IPR000726 GO:0004568|GO:0006032|GO:0016998
Bisa02g3996 263 FunFam Endochitinase (Chitinase) 134 193 - -
Bisa02g3996 263 FunFam Class IV chitinase 16 63 - -
Bisa02g3996 263 ProSiteProfiles Chitin-binding type-1 domain profile. 19 54 IPR001002 GO:0008061
Bisa02g3996 263 SUPERFAMILY Plant lectins/antimicrobial peptides 19 56 IPR036861 GO:0008061
Bisa02g3996 263 CDD chitinase_GH19 66 263 - -
Bisa02g3996 263 Gene3D Endochitinase, domain 2 134 191 - -
Bisa02g3996 263 Gene3D - 64 263 - -
Bisa02g3996 263 PIRSF Endochitinase 1 263 IPR016283 GO:0004568|GO:0005975
Bisa02g3996 263 Pfam Chitinase class I 216 263 IPR000726 GO:0004568|GO:0006032|GO:0016998
Bisa02g3996 263 Pfam Chitinase class I 66 209 IPR000726 GO:0004568|GO:0006032|GO:0016998
Bisa02g3996 263 Gene3D - 15 63 IPR036861 GO:0008061
Bisa02g3996 263 Pfam Chitin recognition protein 20 52 IPR001002 GO:0008061
Bisa02g3996 263 FunFam Endochitinase PR4 56 142 - -
Bisa02g3996 263 CDD ChtBD1 24 48 - -
Bisa02g3996 263 PANTHER CHITINASE-RELATED 5 263 - -
Bisa02g3996 263 SUPERFAMILY Lysozyme-like 61 263 IPR023346 -
Bisa02g3996 263 SMART ChitinBD_3 21 52 IPR001002 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3996 Bisa-ChrBisa02 94335978 94336850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3996 2 263 Glycoside Hydrolase AT3G54420 66.667 1.36e-131 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3996 02 94335978 94336850 Bisa02g3996 02 94335978 94336850 ECH