Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3910 ATGCCAGCTCTCTATCTCCTGCATGCTCCCACGGCCAGCTCTTACACTCTCTCTAAAACCCTAAACCTCATTTTCACAATCCCTAGCTCTCGTCCTCTCTCTGGCCCCACTCTTCGCGCACCTTCGCAGTCAAGCGTCTCACTTTCTCACTACAATTATTTCTTAACTTCTCGCCGAATTTTCTCTCGCTCCGCTCCACGGTTTTGTGCCAGTGAATTCTCAGGCAGTGCCAACCCTGAATATGAAGAGGGAGGGTTTGATGAATTGGAGGACAAAGACGAAATTGATTATTCTGACAGCGAGAATTATGATGTCGATGTCACCGCACTTGAGGAAGAAGCGCAGGACGCAGTCCGAGAGTATTCAAGCTCTTTGTCTCGCATACTGAGAATTGAAGACGAGAAAAATGACAAGAAGGAAACAGCTCAAACGCAGAAGAGGAATAAAAGTAGAACAAGCAACGTCCCTGACAATCTTCTTCCAAGGGTTGCGATTGTTGGAAGGCCAAATGTGGGGAAATCAGCATTATTTAATCGTCTTGTTGGGGGAAACAAGGCAATTGTAGTGGATGAACCTGGGGTTACTAGGGATCGCTTATATGGTAGATCATTTTGGGGAGACCATGAATTCATGGTAGTGGACACAGGTGGGGTTCTCACTATTTCAAAATCACAAGAAAGTGTAATGGAGGAGCTGGCTGTTTCTACTACCATTGGTATGGATGGTATTCCACTTGCCTCTAGGGAGGCAGCTGTTGCCAGGATGCCCTCAATGATCGAGAAACAAGCCGCTGCAGCTGTGGAAGAATCATCTGTTATTATATTCCTGGTTGATGGCCAGGCAGGTCTAATGGCAGCTGATGAGGAAATTGCTAATTGGTTACGTAAGAACTACTCCAATAAATGTGTCATTCTTGCAGTTAACAAGTGTGAATCTCCACGAAAAGGAATTATGCAAGCATCTGAATTTTGGTCCCTTGGGTTTGAACCACATCCTGTGTCAGCTATATCAGGGACAGGAACTGGATTGCTACTTGACCTTGTTTGTTCAGGGCTAGAGAAAATTGAGGAACCAGAGAATCTTGATCTGGAAGAAGATTATGTTCCTTCAATGTCAATTGTTGGTAGACCTAATGTTGGCAAAAGTAGCATTTTGAATGCATTAATTGGTGAGGACAGAACAATAGTCAGCCCTGTCAGTGGTACCACCCGTGATGCTATTGATACTGAATTTACTGGAGCAGATGGCCAGAAATTTCGCCTTATTGATACTGCTGGAATCAGGAAAAGGGCAGCCATAGCCTCAGCAGGTAGTATGACAGAGGCTTTGTCGGTAAATCGAGCATTTCGTGCTATTCGCCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACAGAACAGGACTGCAAGATAGCTGAAAGGATAGAAAAAGAGGGGAAAGGCTGTGTGATAGTTGTAAACAAGTGGGATACAATACCGAATAAAAACCAGCAGACTGCAACATACTATGAGCAAGATGTCAGGGAAAAGCTCCGCTTACTTGACTGGGCTCCAATTGTTTATTCTACTGCAATAGCTGGTCATAGTGTTGACAAGATTATTGTTGCTGCTGGTGCAGTTGAAAAGGAGAGATCAAGAAGACTTAGTACTGCTATATTGAATCAAATATTGCAGGAAGCAGTAGCTTTTAAGCCTCCTCCCAGGACACGAGGTGGAAAAAGAGGGCGAGTTTATTACTGCACTCAGGCTGCTATAAGGCCGCCTACGTTTGTTTTCTTTGTCAATGATGCAAAACTTTTTCCTGAGACTTACCGCCGCTATATGGAGAAGCAACTGCGTTCAGATGCAGGTTTCTCAGGCACACCCATCCGGCTTCTGTGGCGCAGCAGAAGGAAAACGGGAAGAGAAGAAGGCAAAGCTGAAACAAGGACACGAGTGAACCTTCCATCACGAGATCGAAAGTTGATGTCAACTACGCTGTAG 1995 0.4501 MPALYLLHAPTASSYTLSKTLNLIFTIPSSRPLSGPTLRAPSQSSVSLSHYNYFLTSRRIFSRSAPRFCASEFSGSANPEYEEGGFDELEDKDEIDYSDSENYDVDVTALEEEAQDAVREYSSSLSRILRIEDEKNDKKETAQTQKRNKSRTSNVPDNLLPRVAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSFWGDHEFMVVDTGGVLTISKSQESVMEELAVSTTIGMDGIPLASREAAVARMPSMIEKQAAAAVEESSVIIFLVDGQAGLMAADEEIANWLRKNYSNKCVILAVNKCESPRKGIMQASEFWSLGFEPHPVSAISGTGTGLLLDLVCSGLEKIEEPENLDLEEDYVPSMSIVGRPNVGKSSILNALIGEDRTIVSPVSGTTRDAIDTEFTGADGQKFRLIDTAGIRKRAAIASAGSMTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRLLDWAPIVYSTAIAGHSVDKIIVAAGAVEKERSRRLSTAILNQILQEAVAFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSRRKTGREEGKAETRTRVNLPSRDRKLMSTTL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3910 664 Gene3D - 551 635 IPR015946 -
Bisa02g3910 664 FunFam GTPase Der 158 359 - -
Bisa02g3910 664 Coils Coil 128 148 - -
Bisa02g3910 664 MobiDBLite consensus disorder prediction 132 155 - -
Bisa02g3910 664 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 551 632 IPR032859 -
Bisa02g3910 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 637 IPR027417 -
Bisa02g3910 664 Gene3D - 158 361 IPR027417 -
Bisa02g3910 664 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 369 549 IPR031166 GO:0005525
Bisa02g3910 664 Pfam 50S ribosome-binding GTPase 372 492 IPR006073 GO:0005525
Bisa02g3910 664 Pfam 50S ribosome-binding GTPase 162 309 IPR006073 GO:0005525
Bisa02g3910 664 FunFam GTPase Der 364 546 - -
Bisa02g3910 664 Coils Coil 100 120 - -
Bisa02g3910 664 PANTHER GTPASE DER 135 660 - -
Bisa02g3910 664 NCBIfam ribosome biogenesis GTPase Der 254 631 IPR016484 GO:0005525
Bisa02g3910 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 356 IPR027417 -
Bisa02g3910 664 Gene3D - 365 546 IPR027417 -
Bisa02g3910 664 CDD EngA1 164 352 - -
Bisa02g3910 664 Hamap GTPase Der [der]. 160 635 IPR016484 GO:0005525
Bisa02g3910 664 MobiDBLite consensus disorder prediction 132 146 - -
Bisa02g3910 664 FunFam GTPase Der 547 635 - -
Bisa02g3910 664 NCBIfam small GTP-binding protein domain 372 516 IPR005225 GO:0005525
Bisa02g3910 664 MobiDBLite consensus disorder prediction 633 654 - -
Bisa02g3910 664 MobiDBLite consensus disorder prediction 633 664 - -
Bisa02g3910 664 PRINTS GTP1/OBG GTP-binding protein family signature 371 391 IPR006073 GO:0005525
Bisa02g3910 664 PRINTS GTP1/OBG GTP-binding protein family signature 421 436 IPR006073 GO:0005525
Bisa02g3910 664 CDD EngA2 371 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3910 Bisa-ChrBisa02 93237615 93243031 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3910 02 93237615 93243031 Bisa02g3910 02 93237615 93243031 ECH