Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3828 ATGGCGTCCCAAGCTAGCCTTCTCCTTCAAAAGCAGCTCAAAGATCTTTGCAAAAACCCCGTCGACGGGTTCTCCGCCGGTTTAGTCGATGAAAACAACATATTCGAATGGAGTGTTACGATAATTGGACCTCCCGATACTCTTTATGAGGGGGGATTCTTCAATGCCATTATGAGTTTCCCACCCAACTACCCAAACAGCCCGCCATCAGTGAAATTTACATCAGAGCTATGGCATCCCAATGTATATCCAGATGGTCGGGTTTGCATTTCAATTCTTCACCCTCCCGGTGAGGATCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACACCTGTTCATACAGTAGAGAGTATTGTATTGAGTATTATATCTATGCTTTCTAGTCCTAATGATGAATCTCCGGCAAATGTTGAAGCTGCTAAGGAATGGAGAGACAGGAGAGAAGAATTCAAGAAGAAGGTTGGCCGCTGTGTGAGGAAGTCACAAGAAATGTTGTGA 501 0.4511 MASQASLLLQKQLKDLCKNPVDGFSAGLVDENNIFEWSVTIIGPPDTLYEGGFFNAIMSFPPNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDRREEFKKKVGRCVRKSQEML 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3828 166 SMART ubc_7 7 164 - -
Bisa02g3828 166 Gene3D Ubiquitin Conjugating Enzyme 2 166 IPR016135 -
Bisa02g3828 166 CDD UBCc 17 159 IPR000608 -
Bisa02g3828 166 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 93 IPR023313 -
Bisa02g3828 166 SUPERFAMILY UBC-like 3 162 IPR016135 -
Bisa02g3828 166 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 4 164 IPR000608 -
Bisa02g3828 166 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 163 - -
Bisa02g3828 166 FunFam ubiquitin-conjugating enzyme E2 7 2 166 - -
Bisa02g3828 166 Pfam Ubiquitin-conjugating enzyme 9 158 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3828 Bisa-ChrBisa02 92151161 92154595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3828 1 137 Miscellaneous Gene Families AT1G17280 31.507 1.74e-13 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0154 12 1896586 1906072 Bisa02g3828 02 92151161 92154595 CCT