Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3727 ATGGAAACTTTGCAGCCACCCAGCGCCACCAGCGTCCAGCTTCGGCAGCTGAAGGTGACAAAACTTATCAAAGAGGAAATCTCTGTCTGTCCTGGGAGGCAGACAACCCGCTTTTTTTGGCAGGGAAAAATGTATTCGTTTGGTAGAAATTGTTTGAAATATGGTAGCTGCTTGGGGAGGAATTATTCGAATCATCTATGCTCTTCAAACTCATTTTTGCAGCAATTTCACGAATCAGCTGTGTTCAATAGTCCCCATGAACAAAAATCTAAGAAGATTTATACCCTTTATTCGACTCAGAAATTTGACCCCTTTTTCCAAATTTCTTCTAATAAAATTTCAGTCCTGTCTGCACGCATTTGCTTTGATTCTCATTATTCAACCAAGCCACCTTCAAGATCATATCGAAGAAGAGCTCGCAAGAGATTGTTAAAAGCCTTGAAACCTACTCTAGACCAAGCCCAATTTCAATTGGCTATGTCCCAACTTTCCCCAAGATTTACTCCAGAAGAACTCTGTAATGTAATTACTTTTCAAGAAGATCCATTAGTTTGTTTGGAGCTATTTAATTGGGCATCGCAAAAACCCAGGTTTCGGCACAATGTATCTACATATCATATAACCATCCAGAAGCTTGGTGCTGCAAAAATGTACCAAGAAATGGATGACATTGTCAATCAAGTTCTTGCTGTTCCATTAATTGGTTCCGAGGCACTTTACAATACTATTATATATTACTTCACTGAAGCTCGAAAGTTGACTAGAGCTGTCAATATATTTAACCATATGAAAAACAGCAGAAATTTGGATTGCAGGCCTTCTATCAGAACCTATAATATCCTTTTTGCAGCACTGTTGAGTAGAGGAAGCAACTCTTACATAAATCATGTGTATATGGACACTACTAGATGTCTGTTCAAGCAAATGGTCAACAGTGGGATAGCGCCTGATATATTTTCTGTAAATTCCATGATTAAAGGTTATGTGCTTTCTCTCCATGTTAATGATGCACTGCGGATATTCCATCAGATGGGCGTGGTTTATGCTTGCCAGCCTAACTCATTTACCTATGATTATCTGATACATGGTTTATGTGCCCAAGGAAGAACAAAGAATGCTATAGAGTTATGTGATGAAATGAAGACCAAGGGCTTCACACCAAGTAGTAAATCTTATAATTCACTTGTCAATGCTTTGGCACTAGGTGGAGAGGTTGAGGAGGCAGTAAAATATCTGTGGGAGATGATTGAAAAGCAGAGGTCAGCTGATTTTATTACATATAGGACTGTACTGGATGAGGTATGTAGACAAAGAAGAGTTCAGGAGGCAATGAGGTTATTGCGGGAGTTGCAAGAGAAGGGCCTTGTGGATGGGCATGCTTATGAAAAGCTTCTTTATGTGCTTGAAGATGATTATGGGAATTCAGTTAGCAGAATCGATCCTGAAGTATTCAACAACATGAAGACATGA 1470 0.3932 METLQPPSATSVQLRQLKVTKLIKEEISVCPGRQTTRFFWQGKMYSFGRNCLKYGSCLGRNYSNHLCSSNSFLQQFHESAVFNSPHEQKSKKIYTLYSTQKFDPFFQISSNKISVLSARICFDSHYSTKPPSRSYRRRARKRLLKALKPTLDQAQFQLAMSQLSPRFTPEELCNVITFQEDPLVCLELFNWASQKPRFRHNVSTYHITIQKLGAAKMYQEMDDIVNQVLAVPLIGSEALYNTIIYYFTEARKLTRAVNIFNHMKNSRNLDCRPSIRTYNILFAALLSRGSNSYINHVYMDTTRCLFKQMVNSGIAPDIFSVNSMIKGYVLSLHVNDALRIFHQMGVVYACQPNSFTYDYLIHGLCAQGRTKNAIELCDEMKTKGFTPSSKSYNSLVNALALGGEVEEAVKYLWEMIEKQRSADFITYRTVLDEVCRQRRVQEAMRLLRELQEKGLVDGHAYEKLLYVLEDDYGNSVSRIDPEVFNNMKT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3727 489 Gene3D Tetratricopeptide repeat domain 293 478 IPR011990 GO:0005515
Bisa02g3727 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Bisa02g3727 489 Gene3D Tetratricopeptide repeat domain 143 292 IPR011990 GO:0005515
Bisa02g3727 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 353 387 IPR002885 -
Bisa02g3727 489 Pfam PPR repeat family 352 400 IPR002885 -
Bisa02g3727 489 Pfam PPR repeat family 239 285 IPR002885 -
Bisa02g3727 489 NCBIfam pentatricopeptide repeat 391 418 IPR002885 -
Bisa02g3727 489 NCBIfam pentatricopeptide repeat 425 456 IPR002885 -
Bisa02g3727 489 NCBIfam pentatricopeptide repeat 355 388 IPR002885 -
Bisa02g3727 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 457 IPR002885 -
Bisa02g3727 489 PANTHER ATPASE EXPRESSION PROTEIN 3 118 465 - -
Bisa02g3727 489 Pfam PPR repeat 425 455 IPR002885 -
Bisa02g3727 489 Pfam PPR repeat 320 344 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3727 Bisa-ChrBisa02 90444608 90447347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3727 201 465 Glycosyltransferase AT1G05670 23.308 2.25e-20 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3727 02 90444608 90447347 Bisa02g3727 02 90444608 90447347 ECH