Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g3693 | ATGCTCCGTCGACGACTCATTGTTTTGCTTTACCTCACTACTCTTCTGCTCCTCTCCTACTTCTCTCTCACGTTATGCAAGACCGCCGAAAGCGACAGCGACGATGAAGATCTCAGCTTTCTCGAAGAAGCTGATAGTGGTTCCACTTCCCACCACGACGACCATTACCCAGATCCGGAAGATTTCGACGAGGATGCCTTCAACATGGATGATCTCGGGGATTTCCCCGGCTTCGACGAGTCGGACGTCGATGGGGAGGCTTACAAAGAGCCCGAGGTGGATGATAAAGACGTTGTTGTATTAAAGGAGGGTAATTTCAGCGACGTTGTGAAGAATTACCGTTTTGTAATGGTCGAATTCTACGCACCCTGGTGTGGTCACTGCCAGGCTTTGGCTCCAGAGTATGCTGCCGCCGCCACGGAGTTGAAGGGTGAGAATGTGATTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTAGCCCAGCAGTACGAAATTCAGGGATTCCCCACTGTTTACTTCTTTGTCGACGGGGTTCACAAGCCTTATAGTGGCCAGAGGACCAAAGATGCTATTGTAACTTGGATTAAGAAGAAGATAGGACCCGGTGTACACAACATAACTACATTAGACGATGCTGAAAGCATACTGACCTCTGAAAGCAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTGGGTCCTGAGAGTGAGGAGCTATCTGCTGCATCCCGACTCGAGGATGATATCAATTTCTATCAAACTGTACATCCTGATGTGGCAAAGCTTTTCCATATTGACCCAGATGTCAAACGACCTACTTTGATCCTGCTCAAGAAAGAGGAAGAGAAATTGAACCATTTTGATGGCCAATTTGTAAAATCTGCAATAGCAGATTTTGTATTCTCCAACAAACTTCCTTTGGTTACAACTTTTACAAGAGAAGCTGCCCAATCAGTTTTTGAAAATCCAATCAAGAAACAGATGTTGCTGTTTGTGACTAAAAATGATTCAGCGAAGTTACTCCCAATATTTCATGAAGCAGCAAAATTTTTCAAGGGAAAGCTGATCTTTGTACATGTGGATTTGGATAATGAAGATGTTGGAAAGCCAGTTTCAGATTATTTTGGCATCAGCGGGGATGCTTCAAAAGTACTTGCATACACTGGAAATGATGATGGAAAGAAATATATGCTTGATGGAGAGGTGACTGTCGACAAAATTAAGGCATTTGGGGTTGATTTCCTCGAAGACAAGCTAAAACCTTTCTTCAAGTCAGATCCAGTTCCTGAAAATAACGATGATGATGTGAAAATAGTGGTAGGGGACAACTTTGACGAGATTGTCTTAGATGAGTCCAAGGATGTTCTCCTGGAGATTTATGCACCCTGGTGTGGTCATTGCCAAGCTCTGGAGCCAACATACAATAAGCTTGCAAAACATCTGCGTGGCATTGATTCTCTTGTTATAGCCAAGATGGATGGAACAACAAATGAGCATCCGAGGGCAAAGACTGATGGATTCCCTACTATTCTCTTCTTCCCAGCAGGAAATAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCATTTTATAAGTTCCTGAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAATCTCAACCTCCAAACCTGATGCGAAGGAGAGTCAGACTGAGAGTAGTAGCAGCAGCGATGTGAAGGATGAACTATGA | 1731 | 0.4402 | MLRRRLIVLLYLTTLLLLSYFSLTLCKTAESDSDDEDLSFLEEADSGSTSHHDDHYPDPEDFDEDAFNMDDLGDFPGFDESDVDGEAYKEPEVDDKDVVVLKEGNFSDVVKNYRFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQQYEIQGFPTVYFFVDGVHKPYSGQRTKDAIVTWIKKKIGPGVHNITTLDDAESILTSESKVVLGFLNSLVGPESEELSAASRLEDDINFYQTVHPDVAKLFHIDPDVKRPTLILLKKEEEKLNHFDGQFVKSAIADFVFSNKLPLVTTFTREAAQSVFENPIKKQMLLFVTKNDSAKLLPIFHEAAKFFKGKLIFVHVDLDNEDVGKPVSDYFGISGDASKVLAYTGNDDGKKYMLDGEVTVDKIKAFGVDFLEDKLKPFFKSDPVPENNDDDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIDSLVIAKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPISTSKPDAKESQTESSSSSDVKDEL | 576 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g3693 | 576 | ProSitePatterns | Thioredoxin family active site. | 456 | 474 | IPR017937 | - | |
| Bisa02g3693 | 576 | PRINTS | Thioredoxin family signature | 165 | 176 | - | - | |
| Bisa02g3693 | 576 | PRINTS | Thioredoxin family signature | 124 | 133 | - | - | |
| Bisa02g3693 | 576 | PRINTS | Thioredoxin family signature | 116 | 124 | - | - | |
| Bisa02g3693 | 576 | Gene3D | Glutaredoxin | 201 | 304 | - | - | |
| Bisa02g3693 | 576 | Gene3D | Glutaredoxin | 431 | 544 | - | - | |
| Bisa02g3693 | 576 | MobiDBLite | consensus disorder prediction | 552 | 576 | - | - | |
| Bisa02g3693 | 576 | FunFam | protein disulfide-isomerase A2 | 200 | 304 | - | - | |
| Bisa02g3693 | 576 | NCBIfam | protein disulfide-isomerase domain | 102 | 199 | IPR005788 | GO:0003756 | |
| Bisa02g3693 | 576 | CDD | PDI_b'_family | 325 | 415 | - | - | |
| Bisa02g3693 | 576 | Gene3D | Glutaredoxin | 86 | 200 | - | - | |
| Bisa02g3693 | 576 | ProSitePatterns | Thioredoxin family active site. | 117 | 135 | IPR017937 | - | |
| Bisa02g3693 | 576 | Pfam | Thioredoxin-like domain | 239 | 410 | - | - | |
| Bisa02g3693 | 576 | NCBIfam | protein disulfide-isomerase | 96 | 576 | IPR005792 | GO:0003756 | |
| Bisa02g3693 | 576 | FunFam | Protein disulfide-isomerase | 87 | 199 | - | - | |
| Bisa02g3693 | 576 | FunFam | Protein disulfide-isomerase | 431 | 544 | - | - | |
| Bisa02g3693 | 576 | Gene3D | Glutaredoxin | 305 | 430 | - | - | |
| Bisa02g3693 | 576 | ProSiteProfiles | Thioredoxin domain profile. | 414 | 543 | IPR013766 | - | |
| Bisa02g3693 | 576 | MobiDBLite | consensus disorder prediction | 32 | 64 | - | - | |
| Bisa02g3693 | 576 | CDD | PDI_b_family | 204 | 303 | - | - | |
| Bisa02g3693 | 576 | Pfam | Thioredoxin | 98 | 198 | IPR013766 | - | |
| Bisa02g3693 | 576 | Pfam | Thioredoxin | 436 | 521 | IPR013766 | - | |
| Bisa02g3693 | 576 | PANTHER | PROTEIN DISULFIDE ISOMERASE | 18 | 575 | - | - | |
| Bisa02g3693 | 576 | SUPERFAMILY | Thioredoxin-like | 430 | 543 | IPR036249 | - | |
| Bisa02g3693 | 576 | FunFam | Protein disulfide-isomerase | 305 | 430 | - | - | |
| Bisa02g3693 | 576 | CDD | PDI_a_family | 99 | 196 | - | - | |
| Bisa02g3693 | 576 | ProSiteProfiles | Thioredoxin domain profile. | 69 | 201 | IPR013766 | - | |
| Bisa02g3693 | 576 | SUPERFAMILY | Thioredoxin-like | 303 | 434 | IPR036249 | - | |
| Bisa02g3693 | 576 | CDD | PDI_a_PDI_a'_C | 436 | 538 | - | - | |
| Bisa02g3693 | 576 | SUPERFAMILY | Thioredoxin-like | 206 | 314 | IPR036249 | - | |
| Bisa02g3693 | 576 | SUPERFAMILY | Thioredoxin-like | 91 | 201 | IPR036249 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g3693 | Bisa-ChrBisa02 | 89883536 | 89887939 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa12g1252 | 12 | 21467072 | 21471009 | Bisa02g3693 | 02 | 89883536 | 89887939 | CCT |